Calothrix sp. NIES-3974: NIES3974_43950
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Entry
NIES3974_43950 CDS
T09641
Name
(GenBank) ABC transporter-related protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3974_43950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cals02000
]
NIES3974_43950
Transporters [BR:
cals02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES3974_43950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
MMR_HSR1
AAA_18
AAA_16
AAA_23
CLN3
AAA_24
RsgA_GTPase
AAA_21
dNK
Dynamin_N
NACHT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAZ07730
LinkDB
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Position
5408235..5409989
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AA seq
584 aa
AA seq
DB search
MGQSRRLSKLGAYLRPHWREAGLGIVALFTVNGLGVYIPQLIRNCVDRLSSSNFTDGELW
EFVLPIISLTAAMWLIRMASRIWLFGVGRQVEFDLKQKIFQHLLSMEPAYFATNTSGDLI
SRATSDVDNIRRLLGFAVLSLANTIFAYALTLPYMLAINATITVASLAVYPVMFLLVHLF
SDRLRNEQATVQGRISELSELIQEDVSGIALIKIYAQEENERRAFTRKNQALLNANIQLA
KSRNTLFPLIGGLASISSLIVIWLGAGRIAENSLTVGDFIALLLYVERLVFPTALLGFTI
TAFQRGEVSIDRIEAILSTQPKIYDFAPTQPLPQNQVMGKLEAKHLNYQYPGSKEPALAD
INFRIEPGETIAIVGAIGSGKSTLANSLTRLIDIQPGQLFLDGIDITKISLTDLRSAIAY
VPQDSFLFSTSIKNNIRFGKPLCDIYTVEDAAKIAQIHPEILNFPQKYDTIVGERGITLS
GGQRQRTALARALVVDAPILILDDALSSVDNQTATAILNNLSQGTQRKTVLFITHQLSAA
ATADRIFVMENGKIVQTGTHNELIQQPGLYQSLWNQNHVEELLH
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatcaagaaggctgagtaaactgggtgcttatttacgtccgcattggcgagaa
gctggattgggtattgtagccctattcacggtgaatggattgggtgtgtatattccccaa
ttaatccgtaactgtgtagaccggctttcctctagtaattttactgatggtgaactatgg
gagtttgtgttgccgattatatccttgacggcagcaatgtggttaatacggatggcttcg
aggatttggttgtttggggtgggacgacaggtggagtttgacctgaagcagaaaatcttt
cagcatttgttatcgatggaaccagcgtattttgctacgaatacgtcgggggatttgatt
agtcgtgcgactagtgatgtggataatattcgccgtttgttgggttttgcggttttaagt
ttggcgaataccatatttgcctatgccctaactttaccctatatgttggcaattaatgct
acgattaccgttgcttccttggctgtgtatccggtgatgtttttgctggtacatctattt
agcgatcgcctgcgcaatgaacaagctacagttcaaggtcgcatttctgagttaagtgaa
ttaattcaagaggatgtgagcggaattgctttaattaaaatctatgcccaggaggaaaat
gaacgtcgagctttcacccgcaaaaaccaagccttattgaatgcaaatatccaacttgct
aaaagtcgcaataccctatttcccctaattgggggtttagcaagtattagttcattgatt
gtgatttggttaggtgctggacggattgcagaaaatagtctgactgttggtgattttatt
gctttattattgtacgtggagcggttagtttttcccacggctttgttaggatttacgatt
accgcattccaacggggggaggttagtatcgatcgcattgaagcgattttaagcacccaa
ccaaaaatttacgattttgcacccacccaaccccttccccaaaatcaagtcatggggaaa
ctggaagccaagcacctaaattaccagtaccctggtagcaaggaacccgcattagctgat
atcaacttccggattgaaccgggggaaaccatcgccattgtgggagcgattggttcgggt
aaatccacccttgccaacagtttaacccgtttaattgatattcaaccaggacagttattc
ctagatggaattgatattacaaaaatttcccttaccgatctacgcagtgcgatcgcctat
gtaccccaagatagtttcttgtttagtaccagtatcaaaaataatattcgcttcggcaaa
cctttgtgtgatatctatactgtggaagatgcggcaaaaatagcccaaattcatccagaa
attctcaattttccccaaaaatatgacacaatagtgggagaaaggggaattaccctatcc
ggaggacaacgacaacgaaccgctcttgctcgtgcattggtggttgatgcaccgattctg
attttggatgatgctctgtcaagtgttgataaccaaactgcaaccgcaatcctaaacaat
ctttcccagggaacccaacggaaaacagttttatttattacccatcaactttctgctgct
gcaactgctgatcgaatttttgtgatggaaaatgggaaaattgtccaaactggaacccac
aacgaattgattcaacaacctggactatatcaaagtctgtggaatcaaaatcatgtggag
gagttgctgcattag
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