Calothrix sp. NIES-3974: NIES3974_44090
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Entry
NIES3974_44090 CDS
T09641
Name
(GenBank) hypothetical protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES3974_44090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cals03021
]
NIES3974_44090
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_44090
Enzymes [BR:
cals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES3974_44090
Transcription machinery [BR:
cals03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES3974_44090
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES3974_44090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF961
DUF1246
Chlorosome_CsmC
Motif
Other DBs
NCBI-ProteinID:
BAZ07744
UniProt:
A0A1Z4NPV0
LinkDB
All DBs
Position
5423936..5424172
Genome browser
AA seq
78 aa
AA seq
DB search
MLKRSRFETTQTQIMHRAEDLISAASNRYRITVQVANRAKRRRYEDFDSGDDMVMKPVLR
AIIEMSDELTQPEIIGEV
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacgctctcgattcgagactacccagacacagattatgcaccgtgcggaagac
ctaattagtgccgcatctaaccgttatcggatcacggttcaagttgcgaatagagctaaa
cgtcgtcgctatgaagattttgatagtggtgacgatatggtgatgaaacccgttttgcgg
gctattatcgaaatgtctgacgagttaacccaaccagaaattattggggaagtttga
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