Calothrix sp. NIES-3974: NIES3974_44560
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Entry
NIES3974_44560 CDS
T09641
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NIES3974_44560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cals03019
]
NIES3974_44560
03009 Ribosome biogenesis [BR:
cals03009
]
NIES3974_44560
03036 Chromosome and associated proteins [BR:
cals03036
]
NIES3974_44560
Enzymes [BR:
cals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NIES3974_44560
Messenger RNA biogenesis [BR:
cals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIES3974_44560
Ribosome biogenesis [BR:
cals03009
]
Eukaryotic type
90S particles
RNase
NIES3974_44560
Prokaryotic type
rRNA processing factors
NIES3974_44560
Chromosome and associated proteins [BR:
cals03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NIES3974_44560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BAZ07791
LinkDB
All DBs
Position
complement(5477125..5477859)
Genome browser
AA seq
244 aa
AA seq
DB search
MHKLLQFKNEKLLRCALTHRSYVHENPDAGEDNERLEFLGDALLNYLSGQYLFFRHPDIN
EDELTRRRSALVDEKQLAKFAVDVGLDFRMRLGKGAIREGGYQNENLLSSTFEAVVAAYY
LDNNSDVEAVRAVVEPLFDSVPQSVVTYRSNIDSKNRFQEWVQRHITTTPPKYITEQIGG
YQHAPEFLARVMVGDKEYGRGRGNSKKKAEMAAAENALELIATIMEGGNKKSAAINRKIG
KGNV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcataaacttctacaatttaaaaatgaaaaactactacgctgcgctttaacccatcgt
tcctatgttcacgaaaatccagatgctggagaagataatgaacgactagaatttttagga
gatgcattattaaactacttaagtggacaatatttatttttccgtcatcccgacattaat
gaagacgaattaacgcgacgacgttctgctttagttgatgaaaaacagctcgcaaaattt
gctgttgatgttgggttagatttccggatgcgtttaggaaagggagcaattcgtgaaggg
ggatatcaaaatgaaaatttactcagtagcacctttgaagctgtagttgcagcttattat
ttggataataattctgatgttgaagcagtgcgagcagtcgttgaacccttatttgattcg
gttccccaaagtgttgttacttatcgctcaaatatagattctaaaaatcgttttcaagag
tgggtacagcgccatattaccactactccacctaaatatattaccgaacaaataggtggg
tatcaacatgcaccggaatttttggctagggtgatggttggggataaagaatatggtcgt
ggtcgaggaaatagtaagaagaaagcagaaatggctgctgcggaaaatgctttagagttg
attgcgacaattatggaaggtggaaacaaaaaatcagcagctattaatcgcaagataggg
aaaggaaatgtttag
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integrated database retrieval system
