Calothrix sp. NIES-3974: NIES3974_48510
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Entry
NIES3974_48510 CDS
T09641
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NIES3974_48510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cals03011
]
NIES3974_48510
Ribosome [BR:
cals03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NIES3974_48510
Bacteria
NIES3974_48510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
DUF2110
Motif
Other DBs
NCBI-ProteinID:
BAZ08181
UniProt:
A0A1Z4NR38
LinkDB
All DBs
Position
complement(5956873..5957727)
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AA seq
284 aa
AA seq
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MDDFVKALDEHDYQFQRGQIVHGKVYQIDSDGAFVDIGGKSSAFVPRDEISLRSVNDIHE
VISLNDELDFLIIRDQDSDGQVTLSRKQLLLRQVWGRLATMQENSESVDVRVVSVNKGGV
TVNVEGLRGFVPRSHLLERENLEALVGQKLTVGFLEVDRVNKRIVLSQRLATRSASFSNL
EIGQLVEGEITGIKPFGLFVDIDGVSALLHIKQVTQKFIDNLETVFQIGQKVKAIIIDLE
EGRGRISLSTKVLENYPGEILENREEVMNSAAARAERIRKTVEN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgattttgtcaaagcacttgatgaacatgattatcagttccaacgcggtcagata
gtgcatggcaaagtatatcaaattgactccgatggtgcttttgttgatattggtggcaaa
tcctcagcgtttgttccccgtgacgaaatctccttgaggagtgtaaatgatattcatgag
gtaatttccctcaatgatgaattagattttttaattattcgtgaccaggattccgatggt
caagtcaccctgtcccgcaagcagttattattaaggcaggtttggggtcgtttagcgaca
atgcaagagaattccgaaagcgttgatgtgcgcgtcgtcagcgtcaataagggaggtgtg
acagtgaatgtggaaggattaaggggatttgtaccgcgatcgcatttgctggaacgagag
aatttggaagctttggtgggacaaaaactaacggttggttttttggaggttgaccgggtt
aataagcgaattgttctgtctcagcgtttagcaacccgttctgcaagctttagtaatttg
gaaattggtcaattggtagaaggggaaattacggggattaagccattcggtctatttgtg
gatattgatggggtgagtgctttactccatattaaacaagtcacccaaaagtttattgat
aacctggagaccgtctttcaaatcggacagaaagtgaaggcaatcattatcgatttagaa
gagggtcggggaagaatttccctttcgactaaggttttggaaaattatcctggggaaatc
ctggaaaaccgcgaagaagtgatgaattctgctgctgctagggctgaacgtatccggaaa
acggtggaaaactag
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