Calothrix sp. PCC 6303: Cal6303_0157
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Entry
Cal6303_0157 CDS
T02372
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cal6303_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calt03400
]
Cal6303_0157
DNA repair and recombination proteins [BR:
calt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cal6303_0157
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cal6303_0157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
AAA_23
nSTAND1
DnaJ_CXXCXGXG
AAA_22
AAA_33
nSTAND3
Viral_helicase1
NACHT
ATPase
MeaB
cobW
MMR_HSR1
FtsK_SpoIIIE
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
AFY99265
UniProt:
K9UUL7
LinkDB
All DBs
Position
complement(184616..187516)
Genome browser
AA seq
966 aa
AA seq
DB search
MSETQFAASSNGNPPKLTHDNSNMIRIRGARQHNLKNVDLEIPRDQLIVFTGVSGSGKSS
LAFDTIFAEGQRRYVESLSAYARQFLGQLNKPDVEAIEGLSPAISIDQKSTSHNPRSTVG
TVTEIYDYMRLLFGRAGEPHCPICDRNIAPQTIDEMVDRIMELPERTKFQILAPVVRGKK
GTHKKLVSGLASQGFVRVRIDGEIRELSDSIELDKNITHTIEVVIDRLVKKDGLQERLVD
SLSTCLKLSEGIAVILYTPEADREETEDQELVFSENFACPEHGAVMEELSPRLFSFNSPY
GACPNCHGIGTLKRFSPELVVPNPEAPVYAAIAPWSEKENSYYLELLYSLGQTHNFELQT
QWSKLTDEQRETILNGESKETKPQDDEKGKKIPIFRGVLPILQRQYEGGSELIKQKLEQY
LVDQACPVCHGKRLKPEALAVKLGKYGILDFTSVSIRDAQDRIETLKLNPRQAQIAELVL
REVKARLKFLLDVGLDYLSLDRPAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLH
QRDNGRLLKTLTRLRDLGNTLIVVEHDEETIRAADYVVDIGPGAGMHGGNIVSQGDLESL
LTAENSLTGAYLSGRRVIQTPTKRREGNGLSLMIKNANRNNLQNISVDIPLGRLVSVTGV
SGSGKSTLINELLYPALQHHITKRVPFPKDIDGIQGLNAIDKAIVIDQSPIGRTPRSNPA
TYTGVFDIIRDVFSQTIEAKARGYKPGQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQ
CEVCKGARYNRETLQVKYKDKSIADVLNMTVEEALEFFTNIPKAVVKLQTLLDVGLGYIQ
LGQPATTLSGGEAQRIKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLLDVLQRLVDKG
NSVLLIEHNLDVIRCSDWIVDLGPEGGDKGGEIIAVGTPEDVAKNKKSYTGSYLKQVLKQ
YPAVVG
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaactcagtttgctgcatcctcgaacggaaaccccccgaagttgacccatgac
aactctaatatgattcggattaggggtgctagacagcacaatctgaagaatgttgatttg
gaaattcccagggaccagttaattgtttttactggtgtttccggttctggtaagtcctcc
cttgcctttgatacgatttttgccgagggacaacgtagatacgttgaatctcttagtgct
tatgcacgacagtttttaggacagttaaataaacccgatgtggaagcaatcgagggttta
agtccagcgatttccatcgatcaaaagtctacttcccataacccgcgttcaaccgtcggt
acagtcaccgaaatttatgattacatgcggttgctgtttgggcgggctggtgaaccccat
tgtcccatatgcgatcgcaatatcgctccgcaaaccattgatgaaatggttgatcgaatt
atggagttgccagaacggactaagtttcaaattctcgcacccgtagttagagggaaaaaa
ggtacccacaaaaagctagtttcgggtttagcttcccaaggttttgtgcgggttcgcatt
gatggggaaattcgggagctttcggattccattgaactagataaaaatattacccatacc
atcgaagttgttatcgatcggttggtgaaaaaagacggacttcaagagcgtttggtggat
tctctctctacatgcctgaagctttcggaaggtatagcggtaatactttatacgcctgaa
gcagacagggaagagacagaagatcaggaattagtattttccgaaaactttgcctgtccc
gaacatggtgcagttatggaagaactatcaccaaggttattttccttcaactccccctat
ggtgcttgtccaaattgtcatggaattgggacattaaagcggttttctccagagttagtt
gtaccaaatccagaggctcctgtctacgcagcgatcgcaccctggtcagaaaaggaaaat
tcctattacttagaactactttatagtttaggacaaacccacaacttcgagttacaaacc
cagtggagtaaactcaccgacgaacagcgggaaactattctcaacggagaatcaaaggag
acaaaaccccaagatgacgagaaagggaaaaaaattccgatttttcgcggtgtcctcccc
atcttacagcggcagtatgaaggtggctctgagttaattaaacaaaaattagaacaatat
ttagtagatcaagcttgtccagtttgtcatggaaagcgcctaaaaccggaagctttagct
gtaaaattgggcaaatacgggattttggactttaccagtgtgtcaattcgtgacgctcaa
gatcgaattgaaaccctaaaactaaatccccgtcaagctcaaattgccgagttagtttta
cgagaagtcaaagccagattaaaatttctcctcgatgttggtttagattacctcagtctt
gaccgtccagcaatgaccctttccggtggtgaagcacaacgcatccgactagcaacacaa
attggttccgggttaacaggggtattgtatgttttagatgaacccagcatcggtttacat
caacgggataacggacgattactcaaaaccctcacccgactccgcgatttgggaaatacc
ctaattgtggtggaacatgatgaagaaaccatccgtgctgccgattatgtggtggatatt
ggtcccggtgcagggatgcatggcggaaatattgtttcccaaggcgatttggagtcttta
ttaacagcagagaactcccttacaggtgcatatttatcaggtagaagagtcatccaaacc
ccaaccaaaagacgggaaggaaatggcttaagcttaatgattaaaaatgctaatcgtaac
aacctccaaaatatcagtgttgatattcctttaggcagacttgtaagtgtgacaggtgta
tctggttctgggaagtcaacattaattaacgaattactttatccagcactacaacatcac
attaccaaaagagttccatttcccaaagatattgatggcattcaaggactcaatgcaatt
gataaagccatagttatcgatcaatcaccaattggacggacacctcgttctaatcctgcc
acatatacaggtgtttttgatattattcgtgatgttttctcccaaacaatcgaagcaaaa
gcacgaggttataaacctggacaattctcttttaatgttaagggtggacgttgcgaagcc
tgtagtggtcagggtgtcaacgtcatcgagatgaattttctccctgatgtatatgtccaa
tgcgaagtttgtaaaggtgccagatataatcgggaaaccctacaggtaaaatacaaagat
aaatcaattgctgatgtcttgaatatgacagttgaagaagcattggaattttttactaat
attcctaaagctgtcgtcaaactccaaacattattggatgttggtttaggatatattcaa
cttggacaacctgcaacaactttatctggtggtgaagcacagcggattaagttagcgaca
gaattatccagacgcgcaactggaaaaacactctatttaatcgatgaaccaactacaggt
ttatcgttttatgatgtccataaacttttggatgtattgcaaaggttggtagacaaaggt
aattctgtactcctaattgagcataatttagatgtaattcgttgttccgattggatagta
gatttgggaccagagggaggggataaaggaggagaaattattgccgtgggaacacccgaa
gatgtggcaaaaaataaaaaatcctacaccgggagttatttgaagcaggtgttgaaacaa
tatccagcggttgtagggtaa
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