Calothrix sp. PCC 6303: Cal6303_0291
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Entry
Cal6303_0291 CDS
T02372
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cal6303_0291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calt03400
]
Cal6303_0291
Enzymes [BR:
calt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cal6303_0291
DNA repair and recombination proteins [BR:
calt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cal6303_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
TraI_hel_assoc_N
PIF1
DNA_pol_lambd_f
AAA_22
Ribosomal_S13
UvrD-helicase
PhoH
Helicase_RecD
NPHP3_N
HHH_2
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFY99384
UniProt:
K9UWL8
LinkDB
All DBs
Position
341798..344047
Genome browser
AA seq
749 aa
AA seq
DB search
MSSAYQANQPSSNAAPNQESITGVVERLTFHSEESGYTVARLQRPRVSELTTITGSFAGI
QPGQTLELNGFWHEHPQYGSQFQVVNYKETKPATITGIEKYLGSGLIKGVGPVTAKRIVA
HFGVETLDIIENQIDRLHEVNGIAKKRIAMIQKAWNEQKAIKEVMIFLQTHGVSTVYAVK
IYKNYGDKSIGIVTNNPYQLATDIYGIGFLTADKIARNLGVPEDSEFRYRAGITHILNEA
SEDGHCYLPQPELIEKVSQCLKTDDHQPNEDAIAQIIKNMSLADELIREISPDKTLLCYN
PAFFNTENNLALLIAQRLRSPINPDMQRVRTWLARFTKSRKVELSPQQQEAVEMAAYSPI
SILTGGPGTGKTFSVRTIVELWKAMGKSIALAAPTGRAAQRLTEMTGLEAKTVHRLLEFD
PKNMGFKRDMKNPLPQKAIIIDEASMLDLFLAYSLIKAISEDSQILVVGDNDQLASVGPG
KVLADLMNSGKVPVVRLTQIFRQAQTSAIIRSAHQINLGQYPNIEPISETPQSDCLWHGG
GQQPEHGVQAISELITDFIPSLGFNPAIDVQVLSPMTRGLVGTRNLNNVLQQLINPPSPQ
KLEVTRGGTVFRVGDRVIQLTNDYNREVFNGDVGFITNIDTEEQEVIVQYQDRDVTYDYA
DLNELALAWSVTIHKSQGSEYRVAIMPLYTQHYMMLSRNLIYTGLTRAKELAIIVGSKKA
IGMAVRSVNQKERYTQLRERLAQISTISS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgcgtaccaagctaaccaaccatcaagtaatgccgctcccaaccaagaatca
atcacgggggtggtagaacgtttgacttttcattccgaggagtcgggttatacggtagcg
cggttgcaacgtcccagggtatcagaattaactacaatcactggtagctttgcaggcatt
caacccggacaaacacttgaattaaatggcttttggcacgaacacccccaatatggttcg
caattccaggttgttaactacaaagaaactaaaccagccacaatcacgggaatcgaaaag
tatttaggtagcggcttaattaaaggagttggtcccgttacagccaaaagaattgtcgcc
cattttggcgtggaaacgttggatatcatcgaaaaccaaattgatcgcttgcatgaagtc
aacggcatcgccaagaagcgaattgccatgattcaaaaagcctggaacgagcaaaaagcc
atcaaagaagtaatgatatttttgcaaacacatggcgtttccactgtctatgcagtcaaa
atctataaaaattatggggataaatctattggaatagtcacaaataacccgtaccaactg
gcaaccgatatttacggcattggcttcctcaccgcagataaaattgcccgtaacttggga
gtccctgaagattccgaatttcgctatcgtgctgggattacccatatattaaatgaagca
tcggaagacgggcattgctatttaccgcaacccgaattgatagagaaagtatcccaatgt
ctcaaaaccgatgatcatcaaccaaacgaggatgcgatcgcacaaatcatcaaaaatatg
tccctcgcagacgaactaattcgggaaatctctcccgataaaacgttactttgctacaac
cctgcatttttcaatactgagaacaacttagcattgctaattgcccagcgtttaagaagc
cccatcaatccagacatgcaacgtgtccgcacatggcttgcacgctttaccaaaagtcgc
aaagttgaactttcaccccaacaacaagaagcagtcgagatggcagcatattcacctatc
tcgattttaactggtggaccaggaacggggaagacctttagtgtgcggactattgtggaa
ctgtggaaggcgatgggaaaatcaattgccctcgcagcacctactggacgagcagcacaa
cgattaactgaaatgacgggattggaagcaaaaaccgtacatagattgctggagtttgac
cccaagaatatgggtttcaagagggatatgaaaaatcccctgccacagaaagcaattatc
atcgatgaggcaagtatgttggatttgtttttggcatacagtttaatcaaagctatatcc
gaagacagccaaattctggtggttggtgataatgatcagctggcttccgttggaccaggc
aaggtgcttgcagatttaatgaattcgggaaaagtacccgtagtacgtcttactcaaata
tttcgccaagctcaaacaagtgcgattattagaagtgctcaccaaatcaaccttggacaa
tatcccaatatcgagccaatttccgagactcctcaatctgattgtttgtggcatggtggt
gggcaacaaccagaacatggtgtccaagcaattagtgagttgataacagattttattcct
tcccttggttttaatcctgccatcgatgtgcaagtattatcgccaatgacacgggggttg
gtgggtacacgcaatctcaataatgtgttgcagcagttaattaatcccccaagtccacag
aagctagaggttacgaggggtgggacagtttttcgagttggggacagggtgattcaactt
accaacgattacaaccgcgaagtattcaatggtgatgtcggatttattaccaacattgac
actgaagaacaggaggtcatcgtacagtatcaagatagggatgtaacctatgactacgca
gatttaaacgaacttgctttggcttggagcgttactattcacaaatctcaaggttccgaa
tatcgagttgcaattatgcccctgtatactcagcactatatgatgctttcgcgtaactta
atttatacaggattaactcgtgcgaaggaattagcaattattgtcggttccaaaaaggcg
attgggatggctgtcaggtcggttaatcagaaggaacggtatacccaactgcgggaaaga
ttggctcaaatttcaacaatttcatcatga
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