Calothrix sp. PCC 6303: Cal6303_0639
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Entry
Cal6303_0639 CDS
T02372
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt03420
Nucleotide excision repair
calt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cal6303_0639
03430 Mismatch repair
Cal6303_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calt03400
]
Cal6303_0639
Enzymes [BR:
calt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cal6303_0639
DNA repair and recombination proteins [BR:
calt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cal6303_0639
MMR (mismatch excision repair)
Other MMR factors
Cal6303_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
DEAD
Epimerase
Motif
Other DBs
NCBI-ProteinID:
AFY99710
UniProt:
K9UVW2
LinkDB
All DBs
Position
complement(754553..756886)
Genome browser
AA seq
777 aa
AA seq
DB search
MPDSPPLTPTPTTFSRTSAINGIRDSLRLGQQKMADWESGKLAVSAVPGAGKSTGMAAAA
AIAIARQYQQAENGFKNNRRQLVVVTFTRSAAANIKIKIREYLKKLSLPQTGFIVQTLHG
LALNIASRHPELSGLDLENVTLITPNQSHRFIRTAVENWISSHPQDYLRLLEGTQFDGEE
TERLRRQSVLRTEVLPELATTVIHEAKSSGIFPQELRKLTHQTNDEYGILSIAAGLYEQY
KNLMQLRDFIDYDDMILAALRVLNNPSARKIEQNQVFAVFEDEAQDSSPLQTQLLEILAT
DATPNPNINLIRVGDPNQAINSTFTPADPIYFREFCSECSNINRLATMDVAGRSTKIVIE
AANFALNWVNSRYQGNPESEHNPKNFLTPFRPQIIHPVDPTDPQPNANPEHVGRGLELYT
PRDIHHTVELLSQRIIELFTPEPSQISAAILVRENRQGRFLAEKLAPICKQNNIILYDAG
ERDRHSHVPEEILALLQLCDRPHSPDYLKAALQVMVQRQLIPTQDLNALASLPEDFLYPS
PLTAPPTADVEKAAHLCRSLLRARLELPLYQLIPFLALTLNYDQAELATADKLAERVNIQ
ISTNNSLGGMLVILSEIVSSERFESVETENIEARYTGKGQLTIITMHKAKGLDWDYVFLP
FLHENLIPGRFWVPPQRQFLGNFTLSEVARAQIRSALHQEAVPDVTAAWEQAKYLKTAEE
YRLLYVAMTRAKRLLWMSAAQKAPFTWSKPENLQEQAACPVFLALKRQFPQCVVKNQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattccccaccactcacacccacaccaacaacattttcacgaacttcggcaatc
aacggaattcgtgacagtttgcgattgggacagcaaaaaatggcagattgggaatcggga
aaattggcagtatccgcagtccccggtgcaggcaagtctacaggaatggcggctgctgcg
gcaatagcgatcgcgcggcaataccaacaagcagaaaatggattcaaaaataaccgcaga
caactggtggttgtgacttttacccgttctgcggctgctaatattaaaattaagattcgt
gaatatttaaagaaattatccctaccccaaacaggctttatcgtccaaactctccacgga
ttagccttaaatattgccagtcgtcatcccgaattatctggtttagacctagaaaacgtc
actttaattacacccaaccaaagccacagattcatccgcaccgctgtggaaaattggata
tcttcccatccccaagactatttgagacttttggaaggaacacaatttgatggggaagaa
accgaaagattacggagacaatcggtattacgtaccgaagtgctaccagaactagccaca
acagttattcacgaagccaaaagttcgggaatattcccccaggaactacgaaaactcacc
catcaaaccaacgatgagtacggcatcctcagcatcgccgccggattgtatgaacaatat
aaaaacttgatgcagctaagggacttcatcgattacgatgacatgattttagcagcatta
cgtgtcctgaataacccttccgcccgaaaaatcgagcaaaaccaagtatttgcagtcttt
gaagatgaagcccaagattctagccctttacaaacccaactcttagaaatcttagccacc
gatgcgacacccaaccccaacattaacttaatccgtgtcggcgatccaaatcaagccatt
aattccacctttacccccgcagatcccatctactttcgggaattttgctcagaatgtagc
aacatcaaccgacttgcgacaatggatgtcgctggacgcagtaccaaaatcgtcatcgaa
gcggcaaatttcgccttaaattgggtaaatagccgctaccaaggcaacccagaatcagaa
cataacccgaaaaacttcctcacccccttccgtccccaaatcattcaccctgtagacccc
acagacccccaacccaacgcgaatccagaacatgtgggaagagggttagaactatatacc
ccccgcgacatccaccacaccgtcgaattactatcacaacgcatcatcgaactattcaca
cccgaacccagccaaatctccgctgcaatcctagtgagggaaaaccgtcaaggacgcttc
cttgccgaaaaactcgccccaatttgtaaacaaaataatattatcctgtacgatgccgga
gaacgcgatcgccattcccacgtacctgaggaaatactagcacttctccagttatgcgat
cgccctcactccccagactacttaaaagctgcccttcaagtcatggtacagcgccaattg
ataccaacccaagatttgaacgccttagcatctctccccgaagacttcctctatcccagt
cccctcacagcacctccaaccgcagacgtagaaaaagctgcacacctgtgtcggagttta
cttcgcgctcgtttagagttgccactgtatcaactcataccctttcttgccctcaccctc
aactacgaccaagcagaacttgccacagccgacaagctagcagagcgggtaaatatacaa
atctccaccaataattctctgggtgggatgttagttatattgagtgaaatcgttagttct
gagcgctttgagtcggtggaaaccgaaaatatcgaagcccgctacaccgggaaagggcag
ttaacaattatcaccatgcacaaagccaaggggctagattgggattacgtatttctacct
tttctgcatgaaaatttaatacccggcagattctgggttcctccccaaaggcaattcctg
ggaaactttaccctttccgaagttgcccgcgctcaaattcgttctgcactgcaccaagaa
gcagtgccagatgttaccgcagcttgggaacaagcaaaatacctgaaaaccgctgaagaa
taccgtttactctatgttgccatgaccagggcaaaacgcttactgtggatgtctgcggca
caaaaagcaccttttacctggagtaaacccgaaaatctccaagaacaagctgcttgtccg
gtatttttggcattaaaacggcaatttccccaatgtgttgttaaaaatcagtaa
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