Calothrix sp. PCC 6303: Cal6303_1423
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Entry
Cal6303_1423 CDS
T02372
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
calt
Calothrix sp. PCC 6303
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calt03400
]
Cal6303_1423
DNA repair and recombination proteins [BR:
calt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cal6303_1423
Archaeal homologous recombinant proteins
Cal6303_1423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
HALZ
AAA_21
LLC1
Med15_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AFZ00475
UniProt:
K9UZQ9
LinkDB
All DBs
Position
1676224..1679250
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPIQLTLKNFLSYCDATVDFRGLHTACISGSNGAGKSSLLEAMTWAVWGESRAAAEDDV
INTGAKEVRVDFVFGVNQQVYKVIRTRQRGGSGGLELQIETQNGFKAITGKGIRVTQDLI
LQHVKLDYDTFINSAYLRQGRADEFMLKRPSERKEILAELLKLNQYDELEDRAKERSRNC
KVRGEEIEKSLDAMQNQLQQRDAIAQQRVDLETELNQLQQTQQFDQIQLQSLQVVQHQRQ
NWEEQLGFVRQQFSHLNQDCDRLKQEKLNLQTQLSELEQILTQESEIKAGYSQYQKLHTQ
EEELSAKFQKYTQAQQLRQQQQQKLNQQIHARERQLQQAQAQLEALQQQERDVQQTLGKL
PEVEAALEQLATARARLINLDELQMRVTPILQQRQQLQSQLDRAHASLAARLEQLVNTES
KLKQSSQRQPQLQQAVLAVATQIQELEKTRVYLQRVQEKGQERRHFIERLQAQQREYERL
LGELEQKLQMLRTPDAVCPLCERPLDEHHWNRVIKKTETEYHDTEGQLWVFREQMAVSDR
EIQVLRQEYRDISQKLTPYDTLREQRGQLAAQLESSGDAEEQLQQLAREKEHLEQALYLG
DYAPQQQAELRQLDEHLQQLSYSEQDHALARNEVERWRWAEIKQGQIKDAKKRQAQLAAR
KPELIAQIAELEVQIQKEATDSQLAVEIATLESQITEIGYDTSQHQNIRVAVRNNQGWQL
KYQQLQGAQQQHPQLIKRSHDLQTSLAERISQQKELHNQIQAIISQLQQTANPIAQIQAL
EQQIFSRRRQLDEYLAQLGRLEQQAHQLDTLQIQYAQNLQELQENKKKHRIYQELSQAFG
KNGIQALMIENVLPQLEAETNKLLARLSANQLHVQFITQKHGRNGKATKKNTKLIDTLDI
LIADARGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDNEGCD
RLIAAINAIAPDFACILTVTHMPHLKEAFQARIEVNKTQQGSQVRLAV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatccaacttactctgaaaaatttccttagttattgtgatgcaacagttgat
tttcgtggtttgcacacagcttgtatttcgggttccaatggtgctggcaaatcttcatta
ctagaagcaatgacttgggctgtgtggggtgaaagtcgagccgcagcagaagatgatgta
atcaatactggagcaaaagaagttcgagttgattttgtttttggggtaaatcaacaggtt
tataaagtaattcggactcgtcagcgtggtggtagcggtgggttggagttacaaatagaa
actcaaaatggttttaaagcaattactggcaaaggaatcagagtaacacaggatttaatt
cttcagcatgtgaagctggattatgatacgtttattaactccgcatatttacgtcaagga
cgagcggacgaatttatgttgaaacgtcctagtgagcggaaagaaatattagcagaatta
ttaaagttaaatcagtacgatgaattagaggatcgggcaaaagagcgatcgcgtaattgc
aaagttaggggtgaagaaattgaaaaatccctagatgcaatgcaaaatcaactgcaacag
cgagacgcgatcgctcaacaaagggtagatttggaaactgaactaaatcagcttcagcaa
acacaacaatttgaccaaattcaactccaaagtttacaggttgtccaacaccaacggcaa
aattgggaagaacaattaggattcgtgaggcagcaatttagccatctgaatcaagattgc
gatcgcttaaagcaagaaaagctaaatctgcaaacacaattgtcggaactagaacaaata
ctcacccaagaatcagaaatcaaagctgggtattcacagtaccaaaagctacacacccag
gaagaagaactatctgcgaagtttcaaaaatacactcaagctcaacaattacgacaacaa
caacaacaaaagctcaatcaacaaattcatgctcgtgaacgtcaactgcaacaagcacaa
gcacaactagaagctttgcagcaacaagaacgggacgtacaacaaaccctggggaaatta
ccagaagtagaagcagctttagaacaattggcaactgccagggcaaggttaattaactta
gatgaattgcaaatgcgggttacgccaatattacagcaacgccaacaattacaaagtcaa
ttagatcgcgcccatgctagtttagcagcccgcttggaacagttggtaaatactgaaagt
aagctgaaacaatcatcccaacgtcaaccccaactccaacaagcagtgttagcagttgcc
acccaaattcaagaattggagaaaacacgggtttacctgcaacgagtccaagaaaaagga
caagaacgtcgccattttatcgagcgtctccaagcacagcaacgtgaatatgagcggtta
ttgggggaattggaacagaaactgcaaatgttacgaactcctgatgcagtttgtcccttg
tgtgaacgtcccctagatgaacaccactggaatcgagttatcaaaaaaaccgaaacagag
tatcacgacaccgaaggacagttatgggtatttagggaacaaatggcggtttctgaccga
gaaattcaggttttacggcaggaataccgggatatttctcaaaaattgaccccctatgat
accttgcgtgaacaacggggacaattagctgcacagttagaatcatcaggggatgcagaa
gagcagcttcagcaattggcaagggaaaaagaacatttagaacaagctctgtatttggga
gattatgcaccccaacaacaggctgagttacgacaactagatgaacatctgcaacaactc
agttacagtgaacaggatcacgctttagccaggaatgaagttgaaagatggcgttgggct
gaaattaaacaggggcaaattaaggatgcgaagaagcgtcaggcacagctagcagcaagg
aaaccagaattgatagcccaaattgctgagttggaagtgcaaattcaaaaagaagccacc
gattcccagttagctgtggaaattgccaccttagaaagccaaatcacagaaattggttac
gacaccagccaacaccaaaatattcgtgtggcagtacgtaataatcaaggttggcagctt
aagtatcaacaactacaaggagcgcaacaacagcatcctcaattgattaagcgatcgcat
gatttgcaaacctccctagcagaaagaattagccagcaaaaggaactccacaaccaaatt
caggcaatcatttctcaactacagcaaaccgccaaccccatcgcccaaattcaagcccta
gaacaacaaattttttcccgtcgccgccaacttgacgaatatttggcacagttaggacgt
ttggaacaacaagcgcatcagctagatacactccaaatccaatacgcgcaaaatcttcaa
gaactccaagaaaataaaaagaaacaccgtatttaccaggagctatcccaagcatttggt
aaaaatggtatccaagcattgatgattgaaaatgtacttccccaattggaagccgaaacc
aacaagcttttagctagattgagtgccaaccaactacatgtacaatttattactcaaaaa
catgggcgtaacggcaaggcgaccaagaaaaatactaaattaatcgatactctcgatatt
ctcatcgccgatgcacggggtacaagggcttacgagacatattcaggaggtgaagccttt
agaatcaactttgccattcgccttgccttggcgaaactcctagcacagcgagccggtgca
gccttgcagttattaatcgtggatgaaggctttggtacccaagataacgaaggatgcgat
cgcttaatcgcggcaatcaatgccatagcccccgactttgcctgtattcttaccgttacc
cacatgcctcacctcaaagaagcttttcaagcaagaattgaggtgaataaaacccagcaa
ggctcacaggttcgcttggcggtgtaa
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