Calothrix sp. PCC 6303: Cal6303_1944
Help
Entry
Cal6303_1944 CDS
T02372
Name
(GenBank) bacteriocin-processing peptidase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt02010
ABC transporters
calt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cal6303_1944
03070 Bacterial secretion system
Cal6303_1944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calt02000
]
Cal6303_1944
02044 Secretion system [BR:
calt02044
]
Cal6303_1944
Transporters [BR:
calt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cal6303_1944
Secretion system [BR:
calt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Cal6303_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C70
AAA_22
NB-ARC
AAA_29
nSTAND3
Peptidase_C39_2
Guanylate_cyc_2
DUF87
RsgA_GTPase
ABC_ATPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AFZ00978
LinkDB
All DBs
Position
2313160..2315886
Genome browser
AA seq
908 aa
AA seq
DB search
MISQEQLSQQIAAIFGESLSNRELKECLTVLEIVQPPPAKQFWQTTDANGGVYIVLSGKV
RLLESTGNLITTLTTGASFGEQTLFPELGFTFYSVRASTNLKLGYIEADVLRGLMRNNSK
IRDRLLKNAQQLGGLINPSAFPESGFEKDFLPIANHKNIIPFPSSATPNSKKRQAYFPSP
TLTIGHWWGRLVKRYPLIEQQSASDCGAACLVMIGRYWGKRLSVNRLRELTNVSRSGASL
GAVTFAAETIGFTTRPVKASLDKLAQQPLPAIAHWEGKHYIVVYEVSKKRVIVGDPAIGQ
RNLSISEFKAGWNGYALLLQPTSQLQEAEETSTPFWQFFELIKPHFGVLIEVFAASVLIQ
IFGLVTPLFTQLLLDRVIVQGSTLTLNAVGFGLLIFGLFRVVINGLRQYLLDHTANRVGV
ALMVGFIKHTLRLPLSFFESRYVGDIISRVQENQKIQRFLTGEALSIGLDLLTVFIYVGL
MFWYSWQMALLSLAIVPPYFLLAVVATPFLRRISKEVFSAVASENSYLIQSLTGVSSIRS
MAIEQTVRWHWEELLNNLVKKMFKAEVISNQLQIFSAVIETLVTTGLLWYGASLVIQNQL
TIGQLVAFNMLLSNIIMPFQRLIVLWNQLQEVIVSVERINDVLEAEPEEDLQNQPRQHLG
TLKGNIRFDNVTFRYHPESDINVLENLSFEIQPEQTVAIVGRSGSGKTTLSKLILGLYLP
TDGKILIDGQDITSLSLRSLRSQIGVVDQDSFLFGGTIRENISIAHPEASQAEIIEAADS
AGADEFIKRLPMGYETQIGEGGGLLSGGQRQRLAIARALLGNPRLLLLDEATSHLDSESE
RIIQKNLKTILKGRTSVIIAHRLSTVRNADVILVLDQGILVESGNHEQLITKKGHYFYLN
QQQLTVDS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgatttcacaagaacaattgagtcaacaaattgctgctatttttggtgaatctcttagt
aatagggaactcaaagagtgcttaacagtgttggaaattgtccaaccaccaccagcaaag
cagttttggcaaactacagatgctaatggtggtgtttatattgtgctttccggtaaagtt
cgactgctcgaatctacggggaatttaattactaccctgacaaccggagcatcatttggc
gaacaaactctttttcccgaactggggtttactttttactcggttcgtgcatcgacaaat
ttaaaacttggctatattgaggcagatgtattacggggtttgatgaggaataattcaaaa
atccgcgatcgcctgttgaaaaatgcccagcaactaggagggttgattaatccctcagca
tttccagaatctggttttgagaaggatttcctgcctattgcgaatcacaaaaacatcatt
ccctttccttcttcagcaacaccaaactctaagaaaagacaagcttattttcctagtcca
accctaacaatagggcattggtggggacgcttggtgaagcgctatcccttgattgaacag
caaagtgcttccgattgtggagcagcttgtttggtgatgattggtcgttattggggtaaa
cgcttgagtgtgaatcgactgcgggagttaactaatgttagtcgtagtggtgcttccctc
ggtgctgttactttcgctgccgaaaccattggttttacaactcgtccagttaaagccagt
ctggataaattggcacaacaaccgttacctgcgatcgcgcattgggaagggaagcattat
atcgttgtttacgaggttagcaaaaagcgagtaattgtgggcgatcctgccatcggtcag
cgtaatctcagtatttctgaatttaaagctggttggaatgggtacgcattattactccaa
cctacaagtcaacttcaagaagctgaagaaacaagtactccattttggcagttttttgaa
ttaattaaaccccatttcggcgtattaatagaggtctttgcggcttcggtattgattcaa
atatttggattggtgacacccttatttactcagttacttttggatcgggtaattgttcag
ggtagcactttgactttgaatgctgtgggttttggtttgctgatttttggtctatttcgt
gttgtcatcaatgggttacggcaatacttactcgaccatacagcaaaccgggtgggagtt
gctttgatggtaggttttattaaacatactctgcgcttacctttatctttctttgaatct
cgttatgtgggagatattatatcccgtgttcaagagaaccaaaaaattcaacgttttctc
acgggggaagctttatcaattggtttggatttactgacggtatttatctatgtcggtttg
atgttttggtacagttggcaaatggcactattgagtttagcaatcgtgccaccatatttt
ttacttgcagtggttgccacaccctttttacgtcgcatttccaaggaggtatttagtgca
gttgccagtgaaaacagctatctaattcaaagtctcactggagttagttccattcgttca
atggcaatcgaacagacagtacgttggcattgggaagaattgctgaataacttagtcaaa
aaaatgtttaaagctgaagttattagcaatcaactgcaaatttttagtgcggtgatcgaa
accttggtgacgacagggttactttggtatggagcatcgttagtgattcaaaaccagtta
accatcgggcaattagtcgcttttaacatgctgttgagtaacattattatgcctttccag
aggttgattgtgttgtggaatcaactccaagaagtaattgtctctgtagaacggattaat
gatgtattggaagcggaaccagaggaagacttacagaatcaaccccgtcagcatttggga
accttgaaaggaaatattcgctttgataacgtcacatttcgctaccatcccgaaagcgat
atcaatgtattagaaaacctcagctttgaaattcaaccagagcaaacagtggcaatcgtg
gggagaagtggttcgggaaaaacaaccctatccaaattgattttaggtttatatctgccg
acagatggcaagatactgattgacggtcaagatatcactagtctttccttgcgatcgcta
cgttcccaaatcggtgttgtagaccaagattcctttttgtttgggggtacgattcgggaa
aacatcagtattgcccatccagaagctagtcaagcagaaatcatagaagcagcagattca
gcaggtgcagatgaatttattaaacgattaccaatgggttatgaaacccaaattggtgaa
gggggaggtttgttgtctggtggacaaagacagagacttgcgatcgcacgcgctttgtta
ggtaatccccgtctattgcttttagatgaagctaccagtcacctcgactcggaatctgag
cgcatcattcaaaagaacctgaaaacaatcctcaaaggacgtaccagtgtgattattgct
caccgtctttccactgtgcggaatgccgatgtaattttagtcttagaccagggtatttta
gtggaaagtggtaatcacgagcaattaatcactaaaaaaggtcattatttttatctgaat
cagcaacaattaactgttgattcttaa
DBGET
integrated database retrieval system
