Calothrix sp. PCC 6303: Cal6303_3263
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Entry
Cal6303_3263 CDS
T02372
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cal6303_3263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calt03019
]
Cal6303_3263
03016 Transfer RNA biogenesis [BR:
calt03016
]
Cal6303_3263
Enzymes [BR:
calt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cal6303_3263
Messenger RNA biogenesis [BR:
calt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cal6303_3263
Transfer RNA biogenesis [BR:
calt03016
]
Prokaryotic type
tRNA degradation factors
Cal6303_3263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
aRib
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AFZ02204
UniProt:
K9V3C1
LinkDB
All DBs
Position
complement(3851406..3853556)
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AA seq
716 aa
AA seq
DB search
MGEFEKSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRSQARDGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPERVILTSRLIDRPLRPLFPSWLRDDLQVVAVTMSMDE
LVPPDVLAVTGASIATLLAGIPFNGPMAAVRVGLVGDDFVINPTYAEIEAGDLDLVVAGS
PDGVIMVEAGANQLPERDIIEAIEFGYEAVQDLIQAQRDLMAELDLKIVQEQPPEADASL
ENFIGDRATADIKKILAQFEFTKTQRDAALDEVKAGIQEAIAQLPEDDSIKLAATANSKT
LGNTFKDITKKLMRRQIVEDNVRVDGRKLDQVRPVSCQVGIIPKRVHGTGLFNRGLTQVL
SACTLGTPGDAQNLNDDLQSDQQKRYIHHYNFPPYSVGETRPLRTPGRREIGHGALAERA
LIPVLPPKHEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKISGLSLDIIAQAVNEAKSAR
LHILEKMLQAIDKPRAEMSAYAPRLLTIKIDPDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDESKAKKARLIIQGMTRKLNEGDVYLGKVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIIKVREIDGKGRVNLTRLNIHPDQATAAREAATK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttgagaagtcaatatcctttgacggacgggatattcggctgaaagtcggc
ttgttggctccccaggctggtgggtctgttttgatacaatctggagatacagcggtatta
gttacagctacgcgatcgcaagccagagacggcattgattttttgcctttgacagttgat
tatgaagagcggttgtatgctgctggaagaattcctggggggataatgcgacgtgaaggt
cgtcccccagaaagagtaattctcaccagccgtttgatcgatcgtcctttacgtcctttg
ttcccttcttggttgcgagatgacttacaggtggtcgctgtcaccatgtcgatggatgaa
ttggtacctcctgatgtattagctgttacaggtgcctccattgccaccctactggcagga
atcccctttaatggtcccatggcagccgtgcgtgtcggcttggtgggggatgattttgtc
attaatcccacctacgcagaaatcgaagctggtgatttagacttggtagtagcaggttca
cctgatggggtgatcatggtggaagctggggcaaaccagttaccagaacgggacatcatc
gaagcgatcgagtttggttatgaagctgtgcaagatttgatccaagcgcagcgagatttg
atggcagaattggacttgaaaattgttcaggaacaaccccctgaagctgatgcaagttta
gagaattttatcggcgatcgcgcgacggctgacatcaagaaaattctggcacaatttgaa
tttaccaaaactcaaagggacgcagctttagacgaagttaaggctggaatccaagaagcg
atcgcgcaactaccagaagatgattccattaaacttgccgcaactgccaatagcaaaacc
ctaggcaacaccttcaaggacatcaccaaaaagttgatgcgccgccaaatcgtcgaggat
aatgtccgtgtcgatggtcgcaaacttgaccaggttcgtcctgtatcctgccaagtggga
attatccccaaacgggttcacggtaccggactctttaaccgaggactaactcaagtcctg
tctgcttgtaccctgggaacaccaggagatgcccaaaacctcaacgacgacttacagtca
gatcaacaaaaacgctacatccaccactacaatttccccccctactccgtaggagaaacc
agacccctccgcaccccaggacgtagggaaattggacatggtgccttagcggaaagagca
ttgatccctgtgttaccaccaaaacacgaattcccctacgtaatccgtgttgtatcagaa
gttctttcctccaacggttccacatccatgggttcagtctgcggttccaccttggcatta
atggatgcaggtgtacccatttctaaacccgtcagcggtgctgccatgggtttaatcaaa
gaaggagacgaagttcgcatcctcactgacattcaaggaattgaggactttttgggagac
atggatttcaaggtcgctggtaccgactccggaatcaccgctttacaaatggacatgaaa
atctctggtttatccttagatatcatcgcccaagctgtaaacgaggcaaaatccgcacgc
ttacatattttggagaaaatgctccaagctatcgataaaccccgtgctgaaatgtctgcc
tacgcaccacgtcttctcaccatcaaaattgacccagatatgatcggcttggtgattgga
cccggtggtaaaaccatcaagggtattaccgaagaaactggtgccaaaatagacatcgaa
gatgatggaaccgtgacaatctccgctgtagatgaaagtaaagccaaaaaagctcgtctc
atcatccaaggaatgacacgcaaactcaacgaaggagatgtttatttaggtaaggttaca
cgaattatcccaattggtgcttttgtcgaatttttacctggtaaagaggggatgattcac
atttcccaacttgccgattatcgtgttggtaaagttgaggatgaagtcgcagttggcgat
gaagtcatcatcaaagtgcgagaaattgatggcaaaggtagagttaacttaactcgctta
aacatccatccagatcaagcaaccgcagcgcgtgaagcggcaaccaagtaa
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