Calothrix sp. PCC 6303: Cal6303_3510
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Entry
Cal6303_3510 CDS
T02372
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt00900
Terpenoid backbone biosynthesis
calt01100
Metabolic pathways
calt01110
Biosynthesis of secondary metabolites
Module
calt_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cal6303_3510
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
calt01006
]
Cal6303_3510
Enzymes [BR:
calt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Cal6303_3510
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Cal6303_3510
2.5.1.29 geranylgeranyl diphosphate synthase
Cal6303_3510
Prenyltransferases [BR:
calt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Cal6303_3510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PEX11
Motif
Other DBs
NCBI-ProteinID:
AFZ02442
UniProt:
K9V4S7
LinkDB
All DBs
Position
complement(4164913..4165839)
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AA seq
308 aa
AA seq
DB search
MVAADNLQKTQGQTTFDLKAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGGKRL
RPILTIATCEMTGGTIEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE
DIAILAGDGLLAYAFEYIVEHTKDVPAERVLKVISRLGRAVGAAGLVGGQVVDLESEGKT
DTSLETLNFIHNHKTAALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILDI
TSTQEQLGKTAGKDLASQKVTYPSLWGIEESRNKANQLVADACQELEPFGEKAQPLMVIA
HYITQRDR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcagataatcttcaaaaaacccaaggacaaactacatttgacctcaaagct
tatcttaaagacagacaacagctttgtgaagctgccttggatcaagcagttcccatgcgc
taccccgaaaccatctacgaggcaatgcgctactccctcatggcaggtggtaaacgcttg
cgtcccatcctcaccatcgctacctgtgaaatgactggtggcacaattgagatggcaatg
ccaaccgcttgtgcgatggaaatggttcacacaatgtcgttgattcacgacgatttacca
gccatggataatgatgattatcgacgtggaaagttgacaaatcacaaagtttatggtgaa
gatatcgcaattttagctggtgatggtttactagcttatgcttttgagtatattgtcgaa
cataccaaggatgtcccggcggaaagagtattaaaggtaatttcccgcctgggtagggct
gtgggagccgcaggcttagtcggtggtcaggtggtagatttagaatcagaaggtaaaact
gatacatccctagaaaccctaaactttattcataaccacaaaacggcagcactcctagaa
gcttgtgttgtctgtggcggaatcttagcaggagtgtcggaagatgatttacaacgcttg
tcccggtattcccaaaatattggtttagccttccaaattatcgatgatatcctagacatc
acgtctacccaagagcaactgggcaaaaccgcaggcaaggatctcgcatcccaaaaagtt
acatatcctagtttgtggggtattgaagaatcccgcaacaaagccaatcaattagtggca
gatgcttgtcaagaattagaaccatttggagagaaagcccaaccactgatggtaattgcc
cactatattacgcaacgcgatcgctaa
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