Calothrix sp. PCC 6303: Cal6303_3870
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Entry
Cal6303_3870 CDS
T02372
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt03420
Nucleotide excision repair
calt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cal6303_3870
03430 Mismatch repair
Cal6303_3870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calt03400
]
Cal6303_3870
Enzymes [BR:
calt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cal6303_3870
DNA repair and recombination proteins [BR:
calt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cal6303_3870
MMR (mismatch excision repair)
Other MMR factors
Cal6303_3870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DUF1978
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
DEAD
AAA_12
ResIII
DUF3553
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AFZ02787
UniProt:
K9V5R9
LinkDB
All DBs
Position
4607715..4610066
Genome browser
AA seq
783 aa
AA seq
DB search
MTTTIDFLSHLNPCQRRAVEHYCGPLLVVAGAGSGKTRALTYRIANLILQHRVDPENILA
VTFTNKAAREMKERIQKLFAEQMAMREFGEKFDLLPEYDQVKLRSRVYRTVIKDMWCGTF
HSLFSRILRMDIEKYQDENGRKWQKNFSIFDDSDAQSLVKEIVTKQLNLDDKKFDPRSVR
YAIGNAKNKGLSPKEFELDQPNYRGRVISQVYSAYQDKLAENNALDFDDLILVPTRLFQQ
NSQLLNYWHGKFRHILVDEYQDTNKTQYELIRLLSTNNQSKNDWNWNNRSTFVVGDADQS
IYSFRQADFTILLGFQDDFGDGLADDDTSTMVKLEENYRSCENILEAANHLIENNTQRID
KVLKPTRGAGEQIYLFKADDEVVEADFVINQIRRMETEHPNLNWGSFSILYRTNAQSRPF
EDLLVKYQIPYTVVGGFRFYDRKEIKDILAYLKAIQNPADSVNLLRIINTPRRGIGKSTT
DNLTRAAQELGTNLWEILSDETSVATLAGRAAKSINSFAGIIKKWQTQIETLPVAELVQG
VIEDSGYVQDLHTQGTDEASDRIENIQALYNAVLEFQEENEGEENVNLQSFLEKTSLSSD
LDNLKEGESAVSLMTLHASKGLEFPVVFLVGLEQGLFPNYRSMQDPASLEEERRLCYVGI
TRAQERLFISHARERRLYGSREPAMRSQFLDELPTELIATPGGKRQGYTKTSTGSTKQAK
AKPSSEGETLTWQVGEQVLHRSFGIGEITHVFDSGSKTSVAVKFAALGTKIIDPRVAQLQ
RVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactatcgacttcctcagtcacctcaacccctgtcaacgccgcgctgttgaa
cattattgtggtcctttgcttgttgttgctggtgctggttccggcaaaacaagggcattg
acttatcggattgctaatttaattttgcaacatcgtgtcgatccagaaaacattttggcg
gtgacttttacaaataaagctgccagggaaatgaaggaacggattcagaagctgtttgct
gaacagatggcaatgcgggagtttggggagaaatttgacctgttgccagagtacgatcaa
gttaaactgcgatcgcgtgtttacagaactgtgattaaagatatgtggtgtggtactttc
cacagtctgttttcacggattttacggatggatattgagaaatatcaagatgaaaatggg
cgaaaatggcagaagaatttttcaatttttgatgattctgatgcccaaagtttagttaag
gaaatagttactaaacaactgaatttggatgataagaagtttgatccgcgttcggtaagg
tatgcaattggtaatgccaagaataaaggactttcacctaaggaatttgaattagatcag
cctaattaccggggtcgggtaatttctcaagtttatagtgcttatcaagataagttagct
gaaaataatgctcttgattttgatgatttaattctagttccaactcgattatttcaacaa
aattcccaacttttaaattattggcatggcaaatttcgccatatattagttgatgaatat
caagatacaaataaaactcaatatgaattaattcgtctactttccactaataatcaatct
aaaaatgattggaattggaataatcgttcgactttcgtcgtgggggacgcagatcagtct
atatatagctttcgccaagctgatttcactattttactaggctttcaagatgactttggt
gatggtttagcagatgatgatactagcacaatggtgaagttagaagagaactatcgctct
tgtgaaaatattttagaagctgcaaatcatctgattgaaaataatactcaacggattgat
aaagtcctcaaacctaccaggggagccggagagcaaatttatttatttaaagctgatgat
gaggtggtagaagccgactttgtaattaatcaaattcgacggatggaaacagaacacccg
aatttaaattggggtagcttctcaattttatatcggacaaatgcccaatcccgtccattt
gaagatttactggttaaatatcaaattccctatactgtagttggcggatttagattttac
gatcgtaaagaaatcaaagatattttagcttatctcaaagccatccaaaaccctgccgac
tctgtaaatttactgcggattattaatacacctcgacggggaatcggcaaatcaaccacc
gataatttaacccgtgcagctcaagaattgggaactaatttgtgggaaatactgagtgat
gagacatcagttgcgacattagcgggacgtgcggcaaaatcaattaatagttttgccgga
atcattaagaaatggcaaacccagatagaaacccttccagttgccgaattggttcaggga
gtaattgaagattctggctatgtccaggatttgcatactcagggaactgatgaagcttca
gatagaatcgaaaatattcaagcgctttacaatgcagttttggaattccaagaggaaaac
gaaggagaggaaaacgttaacctgcaatcattcttggaaaaaacctccctcagttccgat
ttagataacttgaaggaaggagaaagtgcagtatctttaatgacattacatgcatccaaa
ggtttggagtttcctgtagtgttcttggtggggttagaacagggactatttcccaattat
cgctcaatgcaagatcccgcatccttggaagaagaacggagactttgttatgtaggtata
acccgtgctcaagaaagattatttattagccatgcaagggaacgtcggctctatggtagc
agagaaccagccatgcgatcgcagttcctggatgagttgcccacagagctaattgctacc
ccgggtggtaagcgtcaaggttatactaagacctcaacaggtagtactaaacaagcaaaa
gcaaaacctagtagtgaaggtgaaacattaacttggcaagttggggaacaagtattacat
cgctcctttggtataggtgaaattacccatgtattcgactctggcagtaaaacttctgtt
gcggtgaagtttgctgcattagggacaaaaattattgatccgagagtagcgcaattacaa
cgggtggagtag
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