Cicer arietinum (chickpea): 101488233
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Entry
101488233 CDS
T02819
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03013
Nucleocytoplasmic transport
cam03015
mRNA surveillance pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101488233
09122 Translation
03013 Nucleocytoplasmic transport
101488233
03015 mRNA surveillance pathway
101488233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101488233
03041 Spliceosome [BR:
cam03041
]
101488233
03009 Ribosome biogenesis [BR:
cam03009
]
101488233
03012 Translation factors [BR:
cam03012
]
101488233
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101488233
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101488233
mRNA cycle factors
Stress granule specific factors
101488233
Spliceosome [BR:
cam03041
]
Complex C
Other components
EJC/TREX
101488233
Ribosome biogenesis [BR:
cam03009
]
Eukaryotic type
90S particles
Helicases
101488233
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
eIF-4
101488233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
101488233
NCBI-ProteinID:
XP_004487929
UniProt:
A0A1S2XH23
LinkDB
All DBs
Position
1:complement(10896543..10901223)
Genome browser
AA seq
406 aa
AA seq
DB search
MAATSVVPANRRRTVNASEDMDFETTEGVTAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQIVDTSVREVQALIVSPTRELASQTEKV
ILAIGDFINIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTVTQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQRERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVALNFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacttcggtggttccggcgaatcgtcggagaacagttaacgcctctgaggat
atggatttcgagacgacggagggtgtgacggcgattggaagcttcgaggagatgggaata
aaagacgatttgcttcgtggaatctaccaatacggtttcgagaaaccctccgcgattcaa
cagcgtgccgttgcgcctatcattcagggacgtgatgttatcgctcaggctcaatctgga
accggcaagacgtccatgattgcgcttacggtttgccagattgttgatacatccgtcaga
gaagtgcaagctttaattgtgtctccaacaagggagctggcctcacagactgaaaaagtt
atattggctattggggatttcataaatatacaagcgcatgcttgcattggaggcaaaagt
gtaggagaagatataaggaaacttgagcatggagttcatgtggtgtctggaactcctggt
cgagtctgtgacatgatcaaaaggagaacattgcgcacaagagctatcaagttgctagtt
ctggatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccaccggatcttcaggtttgcttgatttctgctacactacctcatgaaatt
ctggagatgacaaataagtttatgacagatcccgtgaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaagcaattttttgttgcggttgaaagggaggaatggaagttt
gatactctgtgtgatctttatgatacacttaccgtcactcaagctgtgatattctgtaac
accaagcgaaaggtggactggttaactgaaaaaatgcgcaacaataattttactgtctca
tcaatgcacggtgacatgcctcaaagagaaagagacgcaattatgggagaattccgttct
ggaacaacccgagtattgataacaactgatgtttgggctcgtggccttgatgtacagcag
gtttctctagttattaattatgatcttccaaataatcgagagctgtacattcatcggatt
ggtcgctctggacgttttggacgcaagggtgttgccttaaattttgttaaaagcgatgat
atcaagatcttgagagatattgagcaatattacagtactcagattgatgagatgccaatg
aatgttgctgatcttatataa
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