Cicer arietinum (chickpea): 101488704
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Entry
101488704 CDS
T02819
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like isoform X2
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101488704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101488704
03012 Translation factors [BR:
cam03012
]
101488704
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101488704
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101488704
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101488704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
R3H
HA2_C
OB_NTP_bind
nSTAND3
HA2_N
Ank_5
Ank_2
AAA_22
ATPase
AAA_19
AAA_7
Rad17
CM_2
PhoH
ABC_tran
T2SSE
AAA_23
Ank
Myosin_head
Motif
Other DBs
NCBI-GeneID:
101488704
NCBI-ProteinID:
XP_004491281
UniProt:
A0A1S2XLU2
LinkDB
All DBs
Position
2:49869157..49876409
Genome browser
AA seq
1216 aa
AA seq
DB search
MAKKRANKGGKVSSKNPKIDEPTRIHIAKTMEQFKASNDEVYKFEDDFSNEQRHYVHMLA
IQMGFKSKSSGKGAERKVSVTKTNEKSRSEKEFDELPHFTFSEESKRALGDLFAQFPPGD
GNLKDMIGVNSGGIESARHRIDDIFSAPSMTKDEITRKLKTVNSRRQTVPKLKEITELRS
KLPIASYKDVITSTVESHQVVLISGETGCGKTTQVPQYILDYMWGKGEVCKVICTQPRRI
SAVSVSERISKERGENAGEDVGYKIRLESKGGKQSSIVLCTTGVLLRVLVSSGSRSRRLR
MKHGKDGISGITHIIMDEIHERDRYSDFMLAILRDMLPSHPRLRLILMSATIDTARFSQY
FGGCPIIEVPGFTHPVQTYYLEDVLSVVKSTDADNGPTNNHNLSEEQKLSFDEAINMAWS
SDEWDLLLELVSSEGTPKFLNYQHSLTGLTPLMVFAGRGRVGEMCMLLSLGADCNLRAKD
GTNALQISERENQPEAAEIIKKHLDGSFDSEEEQKLLNKYLEKANTDHVDVGLIEKLIRQ
ICIDSKDSKDGGILVFLPGWDDINRAREKLLASSFFKSSSKFMVMSLHSMVPSMEQKKVF
KRPPPGCRKIVLSTNIAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAK
QREGRAGRCQPGICYHLYSKLRAASLPDFQIPELRRMPIEELCLQVKMMDPNCKIDTFLA
KTLDPPVFESMRNAIVVLQDIGALSADEMLTDLGEKLGSLPVHPLISRMLFFAILMNCLD
PALTIACASDHRDPFTLPMSPDDKKKAVEARYELASLYGGCGDQLAVLAAFECWNNAKQM
GLESRFCSKYYVSPSTMKMLSGMRSQLQMELTRIGFIPSDASSYSVNAHDPGVLHAVLVS
GFYPMVGRLGLLDGFKNKKKAMIETASGDKVRLHNRSSNYKLSFNKKLMRALVVFDEVTR
SDGGMSIRNCSLVGPLPLLLLSAEIAVAPKEEIYHLLEKEEEVEEEGDGDEGSGDEAGGI
DAMELDSKSNENCEDKFMSSPDNMVRIIMDRWLYFGSTAMDVSLIYCLRERLSAAILYRV
TYPRDPLPPILGASMHAITCILSCDGCSGMAVEISSMDKLIDMVVNKAKLGKKPTVTKQV
AKTPKGSSAETKQVAKTPKGCQNSEPSKASTSMSENIGNPSEIRSQPLPQNPSEISSQPL
PQNPSEISSQPLPHLT
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaagggcaaacaagggaggtaaggtatcctctaaaaatcccaaaatcgat
gaacctaccaggattcatattgccaagactatggaacaatttaaagcttcaaacgatgaa
gtttataagtttgaagatgatttctccaatgaacagcgtcattatgtgcatatgttggcc
atacaaatggggtttaaatccaaaagttctgggaaaggggcggaaaggaaagtgtcggtt
acaaaaaccaatgagaagtctaggagtgagaaggagtttgatgaacttcctcatttcaca
ttttctgaagagtcgaaacgggcattaggcgatttatttgctcaatttccacctggtgat
ggaaacttgaaggacatgattggagtaaatagtggcgggattgaaagtgcaagacatagg
attgatgatatttttagcgcgccttctatgacaaaagatgaaattactcggaaattgaaa
actgtaaattctagaaggcagactgtaccaaaattgaaggagatcacagagttgagatct
aagctacctattgcatcttacaaggatgtaattacatcaacagttgaatctcaccaggta
gttctcatttctggtgagactggttgtggcaagactacacaggtcccacaatatattttg
gattatatgtggggtaagggtgaggtatgcaaggttatttgcactcagcctcggcgtatc
tctgcagtatcagtgtccgagagaatttccaaagagagaggagaaaatgctggagaagat
gttggatacaagatacgcttagaaagcaaaggtggaaagcaatcatctattgtgctatgt
actactggagttctattaagggtgttagtttctagcggttctcgaagtcgtcggttaagg
atgaagcatgggaaggatggcatttctggcatcactcatatcattatggatgaaattcat
gaaagggaccgatattcagacttcatgttggcaatactcagagacatgctcccttcacat
cctcgtctacgtctgatattaatgagtgctaccattgatactgcacggttttctcaatat
tttgggggctgcccgattatcgaagttccagggttcactcatccggtccaaacttactat
ttggaggatgtgctttctgttgtaaaatcaaccgatgccgacaatggtccaacgaacaat
cataacctaagtgaagaacagaagctttcttttgatgaagctattaatatggcttggtct
agtgacgagtgggatctgctgttagagttggtttcttctgaaggaaccccaaaattcttg
aattaccagcattctttaactggtcttacaccgctaatggtgtttgctggaagaggtaga
gttggtgaaatgtgcatgctcttatctttaggggcagattgcaatttaagggccaaagac
ggaacaaatgcgctgcagatttcggaaagggaaaaccaaccagaagctgctgaaataata
aaaaagcacttggatggtagttttgactccgaagaagagcagaagctacttaataaatat
ctcgaaaaagccaacaccgatcatgttgatgttggtttgatagagaagctgataagacaa
atatgtattgattcaaaagattcaaaagatggaggcatccttgtttttcttccaggatgg
gatgatataaaccgagcacgagaaaaattgcttgcgtcctcttttttcaagagttcgtca
aaatttatggtcatgtctctgcattcaatggttccatccatggagcaaaagaaggttttt
aagcgcccgcctcctggatgccgcaaaattgttctctcaaccaatattgctgaaacagca
gttaccattgatgatatagtttacgtcatagacactggacggatgaaggaaaaaagttac
gatccttataataatgtgtcaactcttcagtcatcttggatttcaaaagcgagtgctaag
caacgagagggacgtgctggccgctgtcaacctggaatttgctatcatttgtattcaaag
cttcgagcagcttcgttgccagattttcagattccagaacttaggagaatgcctattgag
gagctatgtctgcaggtaaagatgatggatccaaactgcaaaatagacacttttcttgcc
aagacattagatccaccagttttcgagtccatgcgtaatgctattgtagtccttcaagat
attggggcattgtcagccgatgaaatgctcactgatcttggagagaagcttggttctctc
cctgttcacccattaatcagcaggatgctgtttttcgctatcttaatgaactgcctcgat
ccggctttaactattgcatgcgcatccgatcatagagatccatttacgcttccaatgtca
cctgatgacaagaagaaagccgtggaagccagatacgagcttgcttctttatatggggga
tgtggtgatcagttagctgtactggctgcatttgaatgctggaataatgcaaaacaaatg
ggtctagaatcacggttttgttcgaagtattatgtgtctccaagcaccatgaagatgtta
tctggtatgcgtagtcagctccaaatggaacttacccgaattgggtttattccttcagat
gcttcaagttacagcgtcaatgcacatgaccctggcgtgctgcatgcggttttggtatcg
ggtttttatccaatggttgggagattaggtttactcgatggttttaaaaataaaaaaaag
gctatgattgaaactgcaagcggtgataaagttcgcctgcacaaccgttcctcaaattat
aagttgtctttcaacaaaaaattaatgcgcgctttagttgtgttcgatgaggttactcgc
agtgatgggggtatgagcataagaaattgcagtcttgttggaccacttccactcttgctg
ctttcggctgagattgctgttgctccaaaagaagagatttatcatctgttggagaaggag
gaggaggtggaggaggagggcgacggagatgaagggagtggagatgaagccggaggcatt
gatgcaatggagttggattctaagtccaatgaaaactgtgaggataagttcatgtcttcc
cctgataatatggttagaataatcatggaccgttggctttatttcggttcaacagcaatg
gatgtttctctgatatactgcctgagagagcgattatcagcggcaattttataccgagta
acgtatccgagggaccctcttcctcccatcctaggggcttctatgcatgctataacttgc
attctatcttgcgatgggtgttctggcatggcagtggagatcagcagcatggacaaactg
attgatatggtggtaaataaggcaaaactagggaagaaaccaacagtgacaaaacaggtt
gctaagacaccaaagggatcatctgcagagacaaaacaggttgctaagacaccaaaggga
tgccagaactctgaaccttctaaagccagtacatctatgtcggagaacattggaaatcca
agcgagatcagatcccaaccactcccgcaaaatccaagcgagattagttcccaaccactc
ccacaaaatccaagcgagatcagttcccaaccgcttccgcatttaacttga
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integrated database retrieval system
