Cicer arietinum (chickpea): 101489407
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Entry
101489407 CDS
T02819
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101489407
Spliceosome [BR:
cam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101489407
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_3
TGF_beta
DUF1797
Motif
Other DBs
NCBI-GeneID:
101489407
NCBI-ProteinID:
XP_073223662
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All DBs
Position
4:complement(11224624..11231301)
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISEKDLFLLFQRFGAITKLVMLRAKNQALIQMQDVPSAISALQF
YANTQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQVF
SPHGSVEKIVTFQKSAGFQALIQYPSQQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQ
VNYNNDRSRDFTNPNLPTEQKGRPSQLGYGDAGNMYGGVQGSGARAVGYPQMPNAAAIAA
AFGGGLPPGITGTNERCTLLVSNLNPDSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAILFGKRLEVNYSKHPNITQGADTHEYINSNLNRFNRNAAKNYR
YCCSPTKMIHLSTLPQDITEEEIVNLLEDHGTIVNSKVFEMNGKKQGLVQFDTEEQATEA
LVCKHATSLSGSVIRISYSQLQNI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccttccaaggtcattcacgttcgaaatgtcgggcacgaaatatctgaaaag
gatttatttctgctatttcaacgttttggagccataacaaagcttgtgatgttgcgtgca
aaaaatcaggcacttatccaaatgcaagatgttccttctgcaattagtgctttacagttt
tatgcaaacactcagcctagcataagggggaggaatgtttatgtccagttttcctctcat
caagagctaacaacagtagatcaaagtcaaggacggggagatgagccaaaccggattctc
ttagttacaattcatcatgtgctctatcccataacggtggatgtactatatcaagttttt
tctccccatggatctgtggagaagattgtgacatttcagaagtcagctggctttcaggct
ctcatccagtacccatcacaacagagtgctgttgctgcgagaactgcacttcagggtcgc
aatatttatgatggttgctgtcagctggacattcaattctcaaaccttgatgaattacaa
gtgaactacaataatgaccgttcaagagacttcacaaaccctaatctccctacagaacag
aaaggcagaccttcacaacttggatatggtgatgcaggaaacatgtatggtggtgttcag
ggttctggagccagggcagttggatatccacagatgcccaatgctgcagccattgcagct
gcctttgggggaggtttgcctcctggaataactgggacaaatgaaaggtgtacacttctt
gtctcaaatcttaatcctgacagcattgacgaggacaaactgttcaacttgttttcgctt
tatgggaacattgtgagaattaaacttctgcggaataaaccagatcatgcacttgtccag
atgggagatggtttccaagctgaactcgcagtacactttctgaagggagccatattgttt
gggaagcgacttgaggtcaactactcgaagcatccaaacataacccaaggtgctgacacg
cacgagtacatcaactcaaatctcaaccgttttaaccgtaacgcagctaaaaactaccgc
tattgctgctccccgacgaagatgatccatttgtccacactcccacaagacatcactgag
gaggagattgtgaaccttctagaggaccatggaaccattgtcaacagcaaagtctttgag
atgaatgggaagaaacaaggtcttgttcagtttgatactgaggagcaggctactgaagcc
cttgtgtgcaagcatgccacctcactttctggctcagtaattcggatctcatattctcag
ttgcagaatatatga
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