Cicer arietinum (chickpea): 101489580
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Entry
101489580 CDS
T02819
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03020
RNA polymerase
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101489580
09124 Replication and repair
03420 Nucleotide excision repair
101489580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101489580
03400 DNA repair and recombination proteins [BR:
cam03400
]
101489580
Enzymes [BR:
cam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101489580
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101489580
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101489580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
101489580
NCBI-ProteinID:
XP_004512182
UniProt:
A0A1S2YZ30
LinkDB
All DBs
Position
Ca8:6178643..6186728
Genome browser
AA seq
1834 aa
AA seq
DB search
MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI
DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK
FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI
EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR
PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS
LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN
LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL
EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK
LDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQ
LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP
GDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
PEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV
ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGFKP
YEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY
LRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATP
YHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSP
SSPRISPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF
SPSTGYSPSQPGYSPSSTSQYTPQASEKDDKGTQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggatatacggttccctttctctccggcggaggtcgccaaagtccgtatggttcagttt
ggaatactgagtccagatgagatcaggcaaatgtctgtggtgcaaatagagcacggcgag
acgacggagagaggaaaaccaaaaattggaggattgagtgatcctcgacttggaactatt
gataggaagatgaaatgtgaaacttgtactgctagtatggctgaatgccctggtcatttt
ggttacttggagcttgccaaacctatgtttcatattggttttttgaagaccgttctcagt
ataatgcgttgtgtttgctttaactgttcaaaaattcttgctgatgagcaagatcataag
tttaagcaagctttgaggatcaagagtcccaaaaataggttgagaaagattttggatgca
tgcaaaaacaaaaccaagtgtgaaggcggtgatgatattgacatgcctggtcatgatact
gaggagcccgttaaaaagagtcgtggtggatgcggtgctcaacaaccaaaaatcactatt
gaggggatgaaaatgattgcagagtataaagctcaaaggaagaaaagtgatgatcaagaa
cagcttccggaacctgtagaaaggaaacagactctttctgcagaaagggttctgggtgtt
cttaaaaggataagtgatgaggactgccagttgttaggcttgaatcctaagtatgcccgt
cctgactggttgatcttacaagttctcccaattcctcctccacctgtgagaccttctgta
atgatggacacatcctccaggagtgaggatgatttaactcatcagctggccatgataatc
aggcacaatgagaatctgaagagacaggagaggaatggttctcctgcacatattatttca
gagtttgctcagttgttgcagtttcacatagccacatattttgataatgagttgcctgga
ttgccaagggctactcaaagatccggaaggcccatcaaatcaatatgtagcaggcttaaa
gcaaaagaaggccgaattagaggcaacttgatgggaaaacgagttgatttttctgctcga
acggtaatcacacctgatccaaccatcaatattgatcaattgggagtgccgtggagtatt
gctctgaaccttacataccccgagactgtgactccttacaacattgaaagattgaaggaa
cttgttgagtatgggccccatcctccacctggaaaaactggtgcgaagtatatcattcgt
gatgatgggcaaaggcttgatctcagatatttgaagaaaagtagtgatcaccatttggag
cttggatacaaggtggagcgtcatttgaatgatggagactttgttctcttcaatcgtcag
cctagtcttcataagatgtctatcatgggacaccggatcaaaattatgccttattctact
tttcggcttaacttgtcggttacctcaccatataatgctgattttgacggtgatgaaatg
aatatgcatgttcctcagtcatttgaaaccagagctgaggtgttggagctgatgatggtg
cctaaatgtattgtgtcacctcagtcaaataggccagtaatgggaattgtccaagattca
cttttaggatgcagaaaaataacaaagagagatacattcatttcaaaggatgtttttatg
aatatattgatgtggtgggaagattttgacgggaaagttcctactcctacaatattgaaa
ccagagccaatgtggactgggaaacaagttttcaatctgattattcctaagcagataaat
ctaattagatattctagttggcacaatgagaatgaaaagggtcctataacccctggtgat
acgatggtcagaattgaaaagggggaactgcttactggtactctttgcaaaaagactctg
ggaacatccactggaagtctcattcatgtcatttgggaagaggttggccctgatgcagct
cgcaaatttcttggccatactcagtggcttgtaaattactggcttttgcagaatgctttt
agcattggaattggtgatacaattgctgatgcgtcaaccatggagactattaatcagact
atttcacaggctaaggagaaagtgaaacaactcatccgggaagctcaggaaaagaaattg
gaggctgaacctggtcggacaatgatggagtcctttgaaaatagagtaaatcagactctg
aatagagctcgtgatgatgctggaaatagtgcccaaaaaagtttatctgagagcaataat
ctgaaagcgatggtgacagcaggttccaagggaagtttcatcaatatatctcagatgact
gcttgtgtgggccaacagaatgttgagggtaaacgaattccatttgggttcatagaccgt
acattgcctcacttcacaaaagatgattatgggcctgaaagtcgtgggtttgtggagaac
tcgtatcttcgtggactgacccctcaagaattctttttccatgctatgggtggtagggaa
ggtcttattgatactgcagtgaagacttcagaaactgggtatattcagaggcggcttgta
aaggctatggaggatatcatggttaagtatgatgggacagttaggaattctttgggagat
gttatacaatttctctatggtgaagatggtatggatgctgtttggatagaaacacagaag
ctggattcactgaaaatgaaaaaagcagattttgatagggcttttaggtacgaatttgat
gatgaaaactggaagcctacttacatgcttgaagagcctgtagaagacttgaaaacaatt
agagagtttcggaatgtgtttgaggcggaagtacaaaagcttgatgctgataggtttcag
cttgcgactgaaatagccactactggtgatagttctctgccactacctgtcaaccttaag
aggcttatctggaatgctcaaaagacctttaaggttgacttccgaagaccttcggatatg
catcccatggaaattgtggaagctattgataagctccaggagcgacttaaagtagttcct
ggggatgaccttctgagtcaagaagctcagaaaaatgccactctcctgttcaatattcta
cttcgcagtacttttgccagtaaaagggttctggaggagtacaggctctcacgagaggca
tttgaatgggtagtgggagaaatagaatcaaggttcctgcaatcacttgtggcctctggt
gaaatgattggttgtgtggcagcacaatcaattggtgaacctgctacccagatgactctg
aacacgttccattatgctggtgttagtgctaagaatgttactcttggtgttcctaggtta
agggaaattattaatgttgcaaagagaattaagacaccttctctgtctgtgtacttgaaa
cctgaggtttgtaagactaaagagagagccaagagtgtgcagtgtgctttagagtatacc
actctccggagtgtgactcaagctacagaagtgtggtatgatccagacccgatgagtaca
ataatagaagaggatgttgattttgtcaagtcttactatgaaatgcccgatgaagaagtt
gctcttgaaaaaatctcaccttggttgcttcgcatagaactgaatcgtgaaatgatggtg
gataagaagttgagtatggctgacattgccgagaagatcaatcttgaatttgatgatgat
ttgacatgcatatttaatgatgacaatgctgaaaaacttatacttcgaatccgtattatg
aatgatgaagcgcccaagggagaaattcaagatgaatctgctgaagatgatgttttctta
aagaaaatagaaagcaacatgctgactgaaatgaccttacgaggtattgcagatatcaac
aaagtttttataaaaaatacgaaaattcagaagtttgatgagaatgaaggttttaagcct
tatgaagaatggatgcttgataccgaaggtgtcaaccttttagctgttatgtgtcacgaa
gatgtcgatgcaaaaaggactacaagcaaccatttgattgaagttattgaagttcttggt
attgaggcagttcggcggtctctgctggatgaattgcgtgttgtcatttcttttgatggg
tcttacgtcaattacagacacttggctattctttgtgacaccatgacttataggggacat
ttgatggcaattacacgtcatggtatcaacaggaacgatactggcccaatgatgaggtgc
tcatttgaagagactgttgatattctccttgatgctgcagtatatgctgagactgattac
ttgaggggtgttactgaaaatattatgttaggccaactagcccctataggcactggtgaa
tgtgccctgttacttaatgatgagatgttgaagaatgctattgagctccagctacctagc
tatatggaaggtcttgattttggcatgacacctgggcgttccccaatatctgctactcca
taccatgaaggcttgatgtctccaagttatttgttgagtccaaatcttcgtctgtctcct
actaatgatgcacagttttcaccatatgttggtggtatggcattttctcctacttcatct
cctggttacagtccatcttcaccaggctatagtccatcctcacctggatacagccctact
tcaccagggtacagccctacatctcctggttacagtcccacatcacctgggtacagccct
acctctccaacatacagtcctagttctccaggatatagtcctacgagcccagcttattca
cctacaagtccatcctactctcccacttcacccagctacagccccacatcacccagctat
agcccaacatctcccagctacagccctacatctcccagctatagccccacttcacctgct
tacagcccaacttcaccagcatacagccccacttcacctgcatacagtcctacttctcca
tcatatagcccaacatcaccttcctatagtccaacttcgccttcctacagccccacatca
ccctcttacagcccgacatctccttcatatagtcccacgtcacctgcttacagtcccact
tctcctgggtacagccccacatcaccctcttacagcccaacatcaccatcatatagtcct
acttccccaagttacaatccacagtctgcaaagtatagtccttcattggcatattctccc
agcagtccgagaatatctccatcaagtccatatagtcccacatctccaagctacagcccg
acgtctccatcatattcaccaacatctccatcgtattctccctcgagcccaacatacagt
cccagcagcccatataattctgggacgagcccagactacagccctagttcaccgcaattt
agtccaagtacgggttactcaccaagtcaacctggttactcaccatcatcaaccagccag
tacactccgcaggcgagtgaaaaggatgacaaaggcactcaatga
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integrated database retrieval system
