Cicer arietinum (chickpea): 101490066
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Entry
101490066 CDS
T02819
Name
(RefSeq) uncharacterized protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101490066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101490066
03400 DNA repair and recombination proteins [BR:
cam03400
]
101490066
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101490066
Messenger RNA biogenesis [BR:
cam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
101490066
DNA repair and recombination proteins [BR:
cam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
101490066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
Utp25_C
PTEN2_C2
Motif
Other DBs
NCBI-GeneID:
101490066
NCBI-ProteinID:
XP_004500407
UniProt:
A0A1S2Y879
LinkDB
All DBs
Position
5:58539995..58548874
Genome browser
AA seq
908 aa
AA seq
DB search
MDSTLSVLKNYFGYLGFRPYQKEVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGI
VVSPLISLMQDQVMALKQRGVKAEYLSSAQKDYTVQTKAEHGQFDILFMTPEKACTIPNS
FWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRSVLLDVPYVGLTATATEKVRF
DIMNSLKMNNPYIVVGSFDRPNLFYGVKQFNRGQSFIDELVEEISKEVASGGSTIIYCTT
IKDVEQIHKSFTEVGIKAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKPNI
RKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYAADLKSENQKTAVM
ESLMAAQHYCLAATCRRKFLLEHFGEKVAADRCGNCDNCTVLKQQRDMSRESFLLMACIH
SCNGKWGLNMPIDILRGSRAKKIIDYHFDKLPLHGLGKTYQANWWKALGHQLISLGYLKE
TVRDMLRFVSVSSKGEQFLASSRPDYQPPLVLPLIGELEEKENRSTEEFKILATSESEGF
SENEGQLYQMLLEERLKLARSVGTAPYALCGDQTIKKIALTRPSTKARLANIDGVNQHLV
TTYGEYLLQVIQKLSKGLNLSLDGEAILQTNEVRKLSPIVTNKSTKLSTAKYDAWKMWHE
DGLSIHQIANHPGRSAPIQEQTVAQYLLDAAQDGLPFDWTRYIEMIGLKQDYISAIQGAI
LKVGSTDKLKPIKNELPEEITYPHIKTYLTMRTCGISLENIQSEGRQSVKDGKAVNNASN
LSEPSLETRHPESRLEADISTESRMEVDEVVSSTPVNGCQVQKIPLACEAEFTSKRLKVS
EAEEVSLIKLKATESSVVEWLKNLDEGATLTDILKHFNGTNEDSVVELLNFLECDFLIYK
KGSMYRAM
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggactctacgctctccgttctcaagaattacttcgggtatttaggttttcggccttat
cagaaagaggttattgagaaaattattgagaaaagggattgcttggtagtcatggctact
ggtagtggcaagtctttgtgctaccaagtacctccattggttgtgaaaaagactgggata
gttgtaagccctttaatatcattgatgcaagaccaggtaatggctttgaaacagcgaggt
gtcaaagctgaatatctttcaagcgctcagaaagattacaccgttcagactaaagctgag
catggtcaatttgacattctgttcatgactcctgagaaggcatgcacaattcctaacagt
ttctggtctaatttgcttaaagaaggaattagtctttttgctgttgacgaagcacattgc
atatcggaatgggggcatgactttagggtggaatacaagcagttagacaagttacgcagc
gttctgttagatgttccgtatgttggtctaactgcaactgctactgaaaaggttcgattt
gacatcatgaattccctgaagatgaataatccttacattgtagttggttcgtttgatcgc
ccaaatcttttctatggtgtcaagcaatttaaccgtggacaatcttttattgatgagctt
gtggaagaaatttcaaaagaagttgctagtggtggttcaactataatttactgcacaaca
atcaaagatgtagaacagatacataagtcatttacggaagttggtattaaggctggaatg
taccatggccaaatggatggaaaatcacgagaggagtctcatagattatttgttagagat
gaaatgcaaatcatggtggccacaattgcctttggcatgggcatagataaacctaatata
agaaaagtgattcactatggctgccctaagaatctagagtcctactaccaggaaagtggg
cgatgtggtagagatggtatagcttctgtttgttggctttactacacaagaagtgacttt
gcaaagggcgatttttatgctgcagacttaaaatcggaaaaccaaaaaacagctgttatg
gagtcattgatggctgctcaacactactgtctggcggcaacttgcagaagaaagttcttg
cttgaacacttcggggaaaaagttgcagctgatagatgtggaaactgtgataactgcact
gtcttgaagcagcagcgtgacatgtcaagagagtcgtttcttctaatggcttgcattcat
tcatgcaacggaaaatggggccttaatatgccgattgacatcctgcgtggttctcgagca
aagaaaataattgattatcactttgacaagcttccacttcatggacttgggaaaacatac
caagcaaattggtggaaagcactcggacatcaattgatttccctaggttatttgaaggag
actgtccgtgacatgttaagatttgtaagtgtcagttcgaaaggtgagcaatttttagcc
tcttctagaccagactatcaacctcccttagttttgccattgattggtgagcttgaagag
aaggaaaatagaagcacagaagaattcaaaattttggccacttcagaatcagaaggtttt
tcggagaatgagggacagctctaccaaatgcttttagaagaaagattgaagcttgcaaga
agtgtcggaacagctccatatgctctatgtggcgatcaaactatcaaaaaaattgctttg
acgagaccatctacaaaagcaaggctggcaaacattgatggcgtgaatcagcacctagta
acaacgtatggagagtatttgcttcaagttattcagaaactatcaaaaggactaaaccta
tcattggacggtgaagcaattttgcaaactaatgaagtacggaagttatctcccatagta
accaacaaatcaacgaagttgtcaacagctaagtatgacgcgtggaaaatgtggcatgaa
gatggtctttctattcaccagattgctaaccatccaggtagatcagctcctatacaagaa
caaacagttgctcagtatctcctggatgctgcccaagatggattaccatttgattggact
aggtacattgagatgataggactgaaacaagattacatatcagcaattcagggtgctatt
ttaaaagttggatctaccgataagttgaagcctataaaaaatgaattgccggaagagata
acttatccgcacatcaagacttacttgacaatgcgaacctgtggaatatccttagaaaac
attcaatctgaaggtcgccagtccgtgaaagatggtaaagctgtaaataatgcatcaaac
ttatcagagccatctttagaaacacgtcacccggaaagtcgtcttgaagccgacatatct
accgaaagtaggatggaagttgatgaagtagtatcttctacacctgtcaatggttgccag
gtacagaagattccattagcctgtgaggcggaattcacaagcaaacgactgaaagtcagc
gaagcagaggaagtgagtttaattaaattgaaagctacagagagttctgttgtagagtgg
ctgaagaatcttgatgaaggggctactttgactgatattttgaagcacttcaatggaacc
aatgaagattctgttgttgaactgttaaatttccttgagtgtgactttttgatatataaa
aaaggcagtatgtacagggctatgtaa
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