Cicer arietinum (chickpea): 101490397
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Entry
101490397 CDS
T02819
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101490397
03036 Chromosome and associated proteins [BR:
cam03036
]
101490397
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101490397
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101490397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
SH2_2
zf-CCHC_3
HHH_7
SPT6_acidic
YqgF
zf-CCHC_5
HHH_9
Spt6_S1
HTH_44
Tex_central_region
Tex_N
Motif
Other DBs
NCBI-GeneID:
101490397
NCBI-ProteinID:
XP_004499769
UniProt:
A0A1S2Y5R5
LinkDB
All DBs
Position
5:complement(5009245..5020798)
Genome browser
AA seq
2092 aa
AA seq
DB search
MARVRRKSLQDEEEQEKIRRKGKRKQASNVDDDEEDLDEFEVDGFIVDNVDDEEDGGEEE
NSKQTQNKKKKRKRSSKNVLDDDDLELIRENKSLNKEKMSDGKFKRLKKTGVHTEPMEDS
SDDEGSLFDDLFEDESNDAEDDDMSDFIVDEEADVRGKGDSLRQKKSKDMKHSSSLSKEA
KRRSGKSHIVSDDPKNMYIDREGNSVAHTDIPERMQIIEEAVGSIPVDRMSIEEESSWIL
RQLASNINPLFSEAKSCGLVDTINGEDIVRFLELHHIKKYDIPFIAMYRKEQCPSLLEDG
KQGDSENTLSDDSESKPKLNWHKILWIIKELDVKWLHLQKRKSMLQRYYNKHFEEECQMS
FLAEESSFRKQIFDSITNMLEKAETEREIDDVDMKFNLYFPPADEFLSSGYKRPLMKTYY
SDCRKAGLSSVARKFGNPEKFGSLVTLNKVGMDSEEDPEESPEEMASIYKCETFQTSEAV
LKGARHMASLMLSCEVPFRKYVRSIFMDKALVSTNPTMKGNIAIDSFHEFAGFKWLKDKP
LLKFEDFQWLLIQKAEEEELLKVEIKFPEDAIKELMTTCNDAFLKGSEGTSTQLWNEQRK
SILQDTISNFLLPSMEKEARALLHAKAKNWLLMKYGMQFWNRVSVAPYQNNDNATAQERG
VVACCWGNGKPGTTFVMLDSKGELVDVMHAGSLTLRSQNINDQQRRKSDQMLVHKFLTVH
RPKVIVLGAANASCIRLKEDINEIISMMSEDNFQDVSQEMNGLPAVVLGDEGLPHLYEDS
EISTSQLPRQYGIVKRAVALGRYLLNPLAMVATLCGVNKEVLSWKLNTLERFLSSDEKME
MIEWIMIDITNQVGIDINLAIRHDWLLAPLLFISGLGPKKAGILHRELLGGTDVRNRKDL
AKFGLNTKRVFCNAVGFLQVSCDDPNFVDTAGDILDRTRIHPESYSLAEELARAVVTKHY
ADANDTEVNPIECIQNDPKLLESFDMNEYVDSLETTKGEYKRFTLLDIKMELLHGFKDPR
TPYQEPTQDDEFYMVTGETGVALIEGERVQATVRRVLSRQAFCVLESGISGILFREDFSD
DIGDIPLTEKLREGVVLTCKIKLIDKNRCQVNLTCKVSELKNVGEQSFCDTDPYYCQGNI
ILPSQQETTDKKEFVNKNFMSRKISHPHFQNITADQAEEFLEDKAVGEYIFHPSSKGLCY
LTLSLKFFDALYVHKDILEGGKSHEMKSLVELGKTLKVGDEIFENIDEVIGNYVNPLVAH
LKDLINFRKFKKGTKAEVDELLKHEKEEYPNRIPYGLGISYEHPGVFILSYIRSTNPHHE
YIAIHPKGFKFRKQIFNNVEQLMAYFQTHINDNVTKDQSKDYNDSGSGRGRGRGRGRGRG
SGACHKCGESGHMSRECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGT
CYKCGESGHMARECTQEGGGGGGWGGGGSGTCYKCGESGHMARDCTQESGGGGGRGGGTC
YKCGESGHMARDCTQEGGGGGGWRGSSGRGGGRGRGRGRGSERSSFSHDDSIDANDSGGF
ASSKWGVDSNNATNKSFAAGKSWGREGGQNINEGSGNENSGWSAGKNATPSSGGSGWGGT
GGKSWGGNNTNEQSNIEKGGWGLAAASNSESGNENSGWSSAPVKNETPSGGENGWGATGG
KVWGGDSTNKESNTTKGGWGVTAASSGASGNENSGWSAPDGKNATPSGGESGWGGTGGKS
WGGNSTNEESNTTKGGWGVTAASNGASGNENSGWSASHGKNATPSDGESGWGGTGGKSWG
GNSTNEESNTSKGGWGVTAGSNGGSGNENSGWGAAHGKNATPSGGESKWGGTSSGSGWGG
SGGKSWGGSSTNEESNIAESGGSGYGGGGGRGGGGACYKCGESGHMARECTQEGGGGGGR
GGGGRGGRGGGGACYKCGESGHMARDCSQGSSEGGGWGGGGRGGGRGGGACYKCGESGHM
ARECTQEGGGGGGRGGGGACYKCGESGHMARECTQESGGGGRWGGGGGGRGGGGGRGGGA
CYKCGESGHMARDCNQEGGGGAGRYGSGGSGGNCYKCGESGHFARECPASTG
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtaagaagaaaatctcttcaagatgaagaagaacaagagaaaattcgaagg
aaagggaaaaggaagcaagcttctaacgttgacgatgatgaggaagacttggatgagttt
gaggttgatgggtttatagttgataatgttgatgatgaagaagatggcggtgaagaagaa
aattcaaaacaaacgcaaaacaagaagaaaaagagaaagagatcgtctaaaaacgttctt
gatgatgatgatcttgagttaatccgtgagaacaagagtttaaataaagaaaaaatgagt
gatggaaagttcaagaggcttaaaaagactggcgttcatactgagccgatggaagactcc
tccgatgatgaagggtcgctttttgacgatctttttgaagatgagtctaatgatgctgaa
gatgatgacatgtcagattttatagtggatgaagaggctgatgtccgcgggaagggagat
tctctcagacaaaagaagtctaaagacatgaaacattcctcttctctttcaaaagaagcc
aaacgtagatctggcaagtcgcatattgtgtccgatgatcctaaaaatatgtacatagat
agagagggtaactctgtagctcatacagacatacctgagaggatgcagataattgaggaa
gctgtaggatctattccagttgacagaatgagtatagaagaagaaagttcttggatacta
cgtcaacttgcgtccaacataaatccattgttcagcgaggccaaatcctgtggactagtt
gatacaataaatggggaagatattgttaggttcttggaattgcatcatataaagaaatac
gatattccatttattgcaatgtatcgtaaggaacaatgccctagtcttctggaagatggg
aaacagggtgactcagaaaacaccttatcggatgacagtgagagtaaacctaaactgaac
tggcacaagatactctggataatcaaggagttggatgtaaaatggctacatcttcagaag
cggaaaagcatgctccaaagatactataacaaacattttgaggaagaatgccaaatgtct
ttccttgctgaggaatccagtttccgtaagcagatattcgactcgatcaccaatatgctc
gagaaggcggaaacagagagagagattgatgatgttgatatgaagtttaatttgtatttt
ccaccagctgatgagttcttaagtagtggttataaaaggcctctgatgaagacatactat
tctgactgcagaaaggcaggactgtcttcagttgccaggaaatttggaaatcctgagaaa
tttggttctctagttactcttaacaaagtgggaatggacagtgaagaagatccagaggaa
tctccggaggagatggcttcaatatataagtgtgaaacttttcaaacttcagaagccgtc
ctgaaaggcgccagacacatggcttccttgatgttaagctgtgaggtacctttcaggaaa
tatgtccgcagcatatttatggataaggctttagtatcaactaaccctacaatgaaagga
aatatagcaatagattcctttcatgaatttgctggttttaagtggctgaaggacaaacct
ctcttgaagtttgaggattttcagtggcttcttattcagaaggctgaagaagaggaactt
cttaaagttgaaataaaatttcctgaggatgctataaaggagttgatgacaacctgcaat
gatgcttttctcaaaggcagtgaaggaacgtctactcaactatggaatgagcagcgtaaa
tcaatcctgcaggatactatttcaaattttctattgccttctatggagaaggaagcacgg
gcattattacatgctaaggctaaaaactggttattaatgaaatatgggatgcagttttgg
aacagggtctctgtggcaccatatcaaaataacgacaatgctactgcgcaagagaggggg
gtagtggcttgttgttggggaaatggtaagccaggtaccacatttgtcatgttggattca
aaaggagagttggttgatgtgatgcatgctgggtcactgacactgcgatctcagaatatc
aatgaccagcagcgcaggaaaagtgatcaaatgttggtccacaagttcctgacagttcat
cgaccaaaggttattgtactaggagctgctaatgcatcctgtataaggttgaaggaggac
atcaacgagattatttccatgatgtccgaggacaattttcaagatgtcagtcaagagatg
aatggactaccagcagttgtattaggggacgaaggcttgcctcatctttatgaagattca
gagatttcaactagccagcttcccagacaatatggcatcgtcaagagagctgtggctctt
ggacgttaccttctaaatccgctggcaatggttgcaacactctgtggagtcaataaagag
gtcttgtcttggaaattgaacactctggagagattcctatccagtgatgagaagatggag
atgattgaatggatcatgatagatattacaaaccaagttggtatagacataaatttggca
ataagacatgactggcttttggcacctttgctcttcatttctggtcttggacccaagaaa
gctggtattttgcacagagaacttcttggaggtacagatgttagaaatcgaaaggacttg
gctaaatttggactgaacacaaaaagggttttctgcaatgctgttggttttttacaggtt
tcttgtgatgacccaaattttgttgatactgctggcgatatccttgaccgtacaagaatt
catccagagtcatacagtcttgctgaggaattagctagagctgttgttaccaaacattat
gctgatgctaacgataccgaagtgaatccaattgaatgtattcaaaatgatccaaagctg
ctagagagttttgatatgaatgaatatgtagatagtctggaaacaacaaaaggtgaatac
aaaaggtttactctgttggacataaagatggaactactccatggatttaaagatcccagg
accccttaccaggaaccgacacaagacgacgagttctatatggtcaccggagaaactggg
gttgcactaattgaaggagaaagagttcaggcaacagttcgccgtgtactatctcgtcag
gcattctgtgtgcttgaatctggaatatctggaatactttttagggaggacttttcagat
gatattggggatataccgttaacggaaaaattgcgtgaaggtgtcgtgcttacatgcaag
atcaaactaattgataagaatagatgccaggtcaatttgacatgtaaagtgagtgagttg
aagaatgttggcgagcaaagtttctgtgacacggatccctattattgtcaaggaaacatc
atcttgccaagtcaacaagagacaacagacaaaaaggagtttgttaataaaaatttcatg
tccagaaaaatttctcacccccattttcagaatataactgcagatcaagcagaagagttc
cttgaagataaggctgttggggaatatattttccacccaagttcaaagggtctatgttat
ttgaccttatctcttaaattttttgatgcactttatgtgcacaaagacattttggaaggt
gggaagagtcatgagatgaaaagcttggttgaacttggaaagacattaaaagtaggagat
gaaatatttgagaacatagatgaggttattggaaactatgtcaacccattggtagctcat
ctgaaagatttaattaatttccgaaaatttaagaagggcacaaaagctgaagttgacgaa
ctacttaaacatgagaaggaggaatatccaaacaggataccatatggtttaggcatttca
tatgagcatcctggagttttcatattgtcatacattagaagtacaaatccacatcatgag
tatattgctatccatccaaaaggattcaagttcaggaagcaaatattcaacaatgttgag
caactgatggcatattttcaaactcatattaatgataatgttacaaaggaccaatcaaaa
gattacaatgactctggatctggtcgtggtcgtggtcgcggtcgtgggcgtgggcgtggc
agtggggcgtgccacaaatgtggtgaatcaggtcacatgtctagggagtgcactcaagag
ggtggtggaggtggaggaaggggtggtggtgggtcatgctacaaatgtggtgaatcgggt
cacatggctagggagtgcacccaagagggtggtggaggtggaggaaggggaggtgggaca
tgctacaaatgtggtgaatctggtcacatggctagggagtgtacccaggagggtggtgga
ggtggaggatggggcggtggtggcagcggtacgtgctacaaatgtggtgagtcgggtcac
atggctagggactgcacccaagagagtggtggaggtggagggaggggtggtggcacatgc
tacaaatgtggtgagtcgggtcacatggctagggattgcacccaggagggtggtggaggt
ggagggtggagaggcagtagtggacgaggaggcggaagaggtcgtggccgtggacgtgga
tctgagcgtagttctttctctcatgatgatagtattgatgccaatgatagtggtgggttt
gcttcttcaaagtggggcgttgattccaacaatgccaccaataaatcttttgctgctggt
aagagttgggggcgtgaaggtgggcaaaatatcaatgaaggatctggaaatgagaattct
ggatggagtgctgggaagaatgcaactccctctagtgggggtagtggatggggagggact
ggtggtaaaagttggggtggaaataatacaaatgaacaaagcaatatagaaaaaggtggt
tggggactcgcagctgccagtaatagtgaatctggaaatgagaattctggatggagtagt
gctcctgtgaagaatgaaactccttctggtggtgagaatggatggggagcaactggaggt
aaagtttggggtggagatagtacaaacaaagagagcaatacaacaaaaggtggttgggga
gtcacagctgccagcagtggtgcatctggaaatgaaaattctggatggagtgctcctgat
gggaagaatgcaactccctctggtggtgagagtggatggggagggactggtggtaaaagt
tggggtggaaatagtacaaatgaagaaagcaatacaacaaaaggtggttggggagtcaca
gctgccagcaatggtgcatctggaaatgaaaattctggatggagtgcttctcatggaaag
aatgcaactccctctgatggtgagagtggatggggagggactggtggtaaaagttggggt
ggaaacagtaccaatgaagaaagcaatacatcaaaaggtggttggggagtcacagctggc
agcaatggtggatctggaaatgaaaattctggttggggtgctgctcatgggaagaatgca
actccttctggcggtgagagtaaatggggagggactagtagtggaagtggatggggaggg
tctggcggtaaaagttggggtggaagtagtacaaatgaagaaagcaatatagcagaaagt
ggaggaagtggctacggaggcggtggtggacgaggtggcggtggggcttgctataagtgt
ggtgagtcgggtcacatggctagagaatgcacccaggagggtggtggaggcggagggagg
ggcggtggtgggcgcggtggtagaggtggtggtggggcttgctacaagtgtggtgagtca
ggtcacatggccagggactgcagccagggcagtagtgaaggcggagggtggggaggcggt
ggacggggtggcggaagaggtggtggggcatgctacaagtgtggtgagtcgggtcacatg
gctagagagtgcacccaggagggtggtggaggtggaggaaggggcggcggtggggcatgc
tataaatgcggtgagtcgggtcatatggctagggagtgcacccaggagagcggtggaggt
ggacggtggggtggtggaggtggaggtaggggcggtggaggtggaagaggcggtggtgca
tgctacaagtgtggtgagtcgggtcacatggctagggactgcaaccaggaaggtggtgga
ggtgcagggaggtatggcagcggcggcagtggtggaaactgttacaaatgtggggagtct
ggacattttgcgagagaatgcccagcgagcactggttga
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integrated database retrieval system
