Cicer arietinum (chickpea): 101491411
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Entry
101491411 CDS
T02819
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101491411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101491411
03012 Translation factors [BR:
cam03012
]
101491411
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101491411
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101491411
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101491411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
T2SSE
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101491411
NCBI-ProteinID:
XP_004511172
UniProt:
A0A1S2YWS7
LinkDB
All DBs
Position
7:44350572..44378912
Genome browser
AA seq
1149 aa
AA seq
DB search
MHNPKSAASFLIARAKSLQLRHHYHYRSVTSISRSFLFKFQPSLSSPLIFTRFFSGYYNL
EQFSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYEQIANL
AKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLIQEYLDRLQ
LNSEKTADCLDNVKSTNQIKEIDMDENANFCVDESVMEKVLQKRSLRMRNMQRAWQESPE
GKKMLEFRKSLPAYREKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESEIESGRGAF
CSIICTQPRRISAMAVSERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRL
LSDRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFG
GAPTFHIPGFTYPVRSHFLEDVLEMTGYKLSSFNQVDDYGQEKLWKTQKQLAPRKRKNQI
TSLVEDALSKSSFENYSPRTRDSLSSWTPDCIGFNLIEAVLCHICRKERPGAVLVFMTGW
EDISCLRDQLKAHPLLGDPNRVLLQTCHGSMATSEQKLIFDKPPPNVRKIVLATNMAEAS
ITINDIVFVIDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPK
CVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPKHRAVQNAIDFLTMI
GALDEKEHLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLLPQDK
RDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRK
QFSFILKEAGLVDTDASINNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ
VLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHL
KMLDGYVDFFLDPNLADCYLKLKEELDKLIQKKLEDPSIDIHKEGKYLMLAVQELVSGDQ
CEGRFVFGRDSRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRA
LVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNTQHEDDKSPPDVNDNMLKLLGK
RRKSKRRFD
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcataatcctaaatctgcagcttctttcctcatagcacgtgccaagtcacttcaactt
cgccaccactaccattatcgctctgttacttcaatttcacgctcattcttattcaaattt
caaccgtcgctttcttctccgttaatcttcacgcgcttcttctctggatattacaacctc
gaacagttctctgatgatgaatatgaatgtgattttgagaaccaccaggcatcatctacg
gtggccaatgtggatgagtggaaatggaaactcagtatgctattacggaatgaaaaggat
caggagattgtatctagagacaaaagagataggagagactatgaacaaatagctaacctt
gcaaaaagaatgggactttacagtgagctgttcggaaaagtggttgttgcaagcaaggtg
cctcttcctaactaccgaccagatttggatgacaaacgtccacaaagagaggtggtgatt
ccattaagcttgcaaaggagagtggagggtttaatacaagaataccttgatagactacaa
ttaaattctgagaagacagctgactgtctggataatgtgaagtccaccaatcagattaaa
gaaatagacatggacgaaaatgccaatttttgtgtggatgaatctgttatggaaaaggtt
ctccagaagaggagtttgaggatgcgtaatatgcaaagagcttggcaggaatcacctgaa
ggcaagaagatgctggaatttcggaagtctctaccagcatatagagagaaggaaggttta
cttcaagctatagcacgtaatcaggtaatagttatatctggagagactggctgtggtaaa
actactcaacttcctcaatatgtattagagtcagagattgagtctggccgtggggcattt
tgcagcattatttgcacacagcctcgtagaatatctgctatggcagtgtctgagagagtg
tcagcagagagaggggagtctctcggtgaaacagtgggtttcaaagttcggttagaagga
atgagagggaaaaacacccatctgctattttgtactagtggtatattactccgaaggttg
ctgagtgatcggaacctgagtggtataacccatgtgtttgtggatgaaattcacgagcga
gggatgaatgaagacttcttactgattgtgttaaaggatcttcttccacgtcgtcgagat
ttaagattggtattaatgagtgccactttgaatgctgagcttttttcaaattattttgga
ggtgcaccaacatttcatatcccgggtttcacctatccggtaagatcccactttttagaa
gatgttttggaaatgactggatataagttgtcttctttcaaccaagttgatgattatggt
caagagaaattgtggaaaacacaaaagcaacttgcaccacgaaagaggaaaaaccagatc
acttctcttgttgaggatgctctttctaaatcaagctttgagaactatagtcccaggaca
cgtgattcgctatcttcttggacacctgactgcataggatttaatctcattgaagctgtt
ctatgccatatatgtcggaaggaacggccaggtgctgtcttagtatttatgactggatgg
gaggatataagctgtttaagggatcagcttaaagcacatcctcttttaggagatcccaat
agggttctgcttcaaacatgccatggttcaatggcaacttcggaacagaaactcatattt
gataaaccacctccaaatgtcagaaaaatagtacttgctacaaatatggcagaggcaagt
attacgatcaatgacattgtttttgtcatagactgtggaaaagcaaaggagaccacttat
gatgctttgaataacacgccatgtctactaccttcttggatttcacaagcatctgcgcga
cagagaagaggtagggctggacgtgtgcagccaggagaatgctaccacctttaccctaaa
tgtgtttatgaagccttttctgaatatcagcttcctgaacttttgagaacgcccttgaac
tctctttgcttgcaaataaaaagtctgcaggttgagagcattggagagttcctatcagca
gctttacaggcaccaaagcatcgtgctgtccaaaatgctattgattttctcacaatgatt
ggagccttagatgaaaaagaacatcttaccaatcttgggaagtttctatcgatacttcct
gtagatcccaagctgggaaaaatgttaataatgggagctatatttcggtgctttgaccct
gttcttacaatagttgctggccttagcgtcagagatcctttccttttgcctcaagacaag
agagatttggcagggactgcaaagtcgaggttttctgctaaagattacagtgatcatatg
gctcttgttcgagcatatgaaggatggaaagatgctgaaagagaaggatcagcttatgag
tactgctggagaaactttctctctgcccaaactcttcaggcaattcattcacttcggaaa
cagtttagcttcatcttgaaagaagctggcttggtagatactgatgcaagcattaataac
aaattgagtcataatcaatctcttgtacgtgcagtcatatgctctggactctttcctggt
atagcatcagtggtgcacagggagacatccatgtcatttaaaacaatggacgatggccag
gttttattatacgcaaattcagtgaatgcacgttaccagactattccttacccatggttg
gtttttggtgagaaagtaaaggtcaatgctgttttcatccgtgattccactggtgtatct
gattcgatacttatcttatttggtggtgctctaagtaatgggatacaggccggacatctg
aaaatgttagatgggtacgttgacttctttttggatcctaatttagctgactgctatttg
aagcttaaggaagaacttgataagcttatccaaaagaagctagaagatcctagcattgac
attcacaaggaagggaagtacttgatgcttgctgttcaggaattggtttcaggggatcag
tgtgaaggaagatttgtatttggccgtgacagccggaagcctaaggcctctaacgatgag
aataaattcacaaaagatgggacaaaccccaagagcttgctgcagacacttttgatgcga
gcagggcactccccacctaaatacaaaacaaaacatctcaagacaaatgagttcagggca
ttggtggagtttaaaggaatgcaattcgttggcaaaccaaaaagaaacaaacaacttgca
gagagggatgctgctatagaggcattagcttggttgactcacacctctgacaatactcag
catgaagatgataaatctcctccggatgtcaatgacaacatgttaaaactcctagggaag
cgtagaaagtcaaaacgacgttttgattga
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