Cicer arietinum (chickpea): 101491551
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Entry
101491551 CDS
T02819
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101491551
09123 Folding, sorting and degradation
03018 RNA degradation
101491551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101491551
03041 Spliceosome [BR:
cam03041
]
101491551
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101491551
mRNA degradation factors
5'-3' decay
Lsm complex
101491551
Spliceosome [BR:
cam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101491551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
101491551
NCBI-ProteinID:
XP_004516147
UniProt:
A0A1S2Z6Y4
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Position
7:49990255..49994326
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AA seq
99 aa
AA seq
DB search
MSARKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcggaaagaaacggttctcgatttggcgaaatttatcgacaaaggagttcaa
gtcaagcttactggtggaagacaagtgacaggtactctgaaaggatatgaccagttactt
aaccttgtcctggatgaagctgttgaatttcttagagatcctgatgatccactgaaaact
acagatcagaccagaagtcttggcttaattgtttgcagaggaactgctgtcatgctcgtg
tccccaactgatggtacagatgagatcgcaaatccctttattcagccagatggggcctag
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