Cicer arietinum (chickpea): 101491998
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Entry
101491998 CDS
T02819
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03022
Basal transcription factors
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101491998
09124 Replication and repair
03420 Nucleotide excision repair
101491998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101491998
03400 DNA repair and recombination proteins [BR:
cam03400
]
101491998
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101491998
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101491998
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101491998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
101491998
NCBI-ProteinID:
XP_004503689
UniProt:
A0A1S2YEN2
LinkDB
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Position
6:complement(5136736..5144491)
Genome browser
AA seq
765 aa
AA seq
DB search
MGHGEKRPFKKFKGSSSKFEDPRKGFADDDDAYGGDDPYDDDDGKTKDFSKLELKPDHPN
RPLWACDNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
ETIISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDG
ISRARITSEGMHGDGFTITKAAGEIEGTHDELLNEAEVAAAAEEKEAHAFEIDPSQVENV
KQRCLPNALNYPMLEEYDFRNDTVNPDLEMELKPQAQPRPYQEKSLSKMFGNGRARSGII
VLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKE
RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISI
TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKE
FFAEYLKKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKL
RKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQ
EAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKV
ITSLPPSDEGSRLNYHHLEDQLSLLGKVLNAGDDAVGLEQLEEDSDELALRSARRSQASM
SAMSGAKGMVYMEYSTGRKGQAQIKSKPKDPAKRHFLFKRRYGPT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgggacacggagaaaaaagacccttcaaaaagttcaaaggctcctcctctaaattcgaa
gatccccgaaaaggattcgccgatgatgacgatgcttatggcggcgatgatccatacgac
gatgacgatggaaaaacaaaggattttagcaaattagagttgaaaccggatcaccctaat
cgtcctctttgggcttgtgacaatggccgcatattccttgagacattttctcctttgtac
aaacaagcttatgattttcttattgccatcgccgagcctgtttgcaggcccgagtcgatg
cacgaatacaatcttactccgcactcgttgtatgctgctgtttcggttggtctagaaact
gaaacaattatatcagttttgaacaagttatccaaaaccaagcttcccaaagagatgatt
aaatttatacacgattctactgctaattatgggaaagtgaaactcgttcttaagaagaat
cgttacttcgtggaatctccatttccagaggtattaaagacactgctcagggatgatggt
atatctcgagcaaggatcacttctgagggtatgcatggagatggatttacaatcaccaaa
gcagccggtgaaattgaaggcactcatgatgagttgctaaatgaagcagaagtagcagca
gctgcagaagagaaagaagctcatgcattcgaaattgatccttctcaggttgaaaatgta
aaacaacgttgcttgccaaatgctttaaattatcccatgttggaggagtatgacttcaga
aatgatacagtgaacccagaccttgaaatggaactaaaacctcaagcacaaccacgacca
tatcaagagaagagccttagtaaaatgtttggaaatggtagagcaagatccggcatcata
gttctaccctgtggtgctggaaagtccctagttggtgtttcagcagcttgccggataaaa
aagagctgtctttgtttggcgacgaatgctgtctccgtagatcagtgggcttttcagttt
aaactatggtcaactattcgagaagaacagatttgtcgtttcacatctgatagcaaagag
agattccgtggtaacgctggagttgtcgtgacaacatataatatggttgcttttgggggt
aaacggtctgaagaatctgaaaagatcattgaagaaataagaaacagagaatggggatta
cttcttatggacgaggtacatgtggttcctgctcatatgtttcgaaaagtcattagtatc
actaaatctcactgcaaacttgggctcacagccacacttgtgagagaggacgaacgaatt
acagatctgaacttccttattggtcccaaattgtatgaggcaaattggttagatcttgta
aaaggtggatttattgcaaatgtacagtgtgctgaagtatggtgtccgatgaccaaagag
ttttttgctgagtatttaaagaaagagaactccaagaagagacaggccctttatgtgatg
aatccaaataaattccgagcatgtgagtttctcattaattaccacgaaagggcacgcggc
gataaaattatagtgtttgctgataatctttttgctctgacggagtatgccatgaaactc
cgcaaaccaatgatatatggtgctacaagccatgttgagaggacaaaaattctacaggca
ttcaaaactagcaaagacgtaaataccatttttctttccaaggttggtgacaactcaatc
gatattcctgaagcaaatgtcataattcagatctcttcacatgctggttcaaggcgtcaa
gaagctcaacgtctgggtcgtattcttagggcaaagggaaagcttcaggataggatggca
ggtggtaaagaggagtataatgcatttttctattcccttgtgtcaactgatacccaggag
atgtattactcaactaagaggcagcaatttttaattgatcagggttacagctttaaggta
attacaagcttgcctccatctgatgaagggtctcgtttaaactatcatcacctcgaagat
caattgtctcttcttggaaaggtattgaatgccggtgatgatgcagttggattagagcaa
ctagaagaagactcagatgaattagctcttcgaagtgctcgtcgttctcaagcatccatg
agtgcaatgtcaggtgcaaaagggatggtttatatggagtacagtactgggcgtaaaggc
caagcacagatcaaaagcaagccgaaagatccagcgaagagacacttcttattcaaaaga
cgatatggcccaacctaa
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integrated database retrieval system
