Cicer arietinum (chickpea): 101493530
Help
Entry
101493530 CDS
T02819
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03022
Basal transcription factors
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101493530
09124 Replication and repair
03420 Nucleotide excision repair
101493530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101493530
03400 DNA repair and recombination proteins [BR:
cam03400
]
101493530
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101493530
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101493530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
101493530
NCBI-ProteinID:
XP_012571342
UniProt:
A0A1S3E699
LinkDB
All DBs
Position
5:59765895..59771004
Genome browser
AA seq
315 aa
AA seq
DB search
MTSAPSKLYADDVSLLVVTLDTNPFFWTTFPFHFSEFLSQVLAFLNSILLLGQLNQLVVI
ATGCNSCGYIYDSTSNRNHASTNGTMPALYSNLLHNLEEFLARDQKLTMPHAPVTVPSSL
LSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSTDGPEQYVAIMNAIFSAQRSSVPVDSC
YIGSNNSAFLQQASYITGGIYYRPPQMDGLFQYLSTVFATDLHSRAFLRLPKSLGVDFRA
SCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTSLYLARLNQMLPQQTTGKERLHNVSGLIT
LILSCPSRELICYVS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgctccttcaaaactttacgcagatgacgtcagccttctcgttgtcacactc
gacacaaaccctttcttctggaccacttttcccttccacttctccgagttcctctctcaa
gttctcgcttttctcaattcaatacttcttctcggccagcttaatcaactcgtagtcatc
gccactggatgcaattcatgtggatacatttacgattccacttccaataggaaccatgct
tccacaaacggtacaatgcctgcgctttattccaatcttctacacaatctcgaagaattc
ctcgctagggatcagaaattgaccatgcctcatgcaccggtcacagttccttcttcgttg
ttatcgggatcattgtccatggctctctgctatatacagagagcttttcgttcaggaccg
atgcatcctcagcctcggattttatgtctgcaaggatctactgatggaccagaacagtac
gtggcaatcatgaatgcaatattctctgctcagcgttcttcagttcctgtagattcttgt
tatattggttcaaataattctgcattccttcagcaggcttcatacataactggtggcata
tattacaggcctccccaaatggatgggctttttcaatatctttcaacagtatttgcaact
gatttgcattctcgtgcatttttaaggcttcctaaatctcttggtgtggactttcgtgcc
tcgtgcttctgccataagcaaacaattgacatgggctatgtatgttctgtatgcttatcc
atattttgtgagcatcacgacaagtgttcaacctctctgtatttggccaggctcaatcaa
atgttgcctcagcagacaaccggaaaagaaaggcttcataatgtttccgggctcataaca
cttattttgtcatgtccatcaagagagcttatctgttatgtctcttga
DBGET
integrated database retrieval system
