Cicer arietinum (chickpea): 101496250
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Entry
101496250 CDS
T02819
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101496250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101496250
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101496250
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101496250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101496250
NCBI-ProteinID:
XP_012572423
UniProt:
A0A1S3EAJ3
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All DBs
Position
1:48309530..48310715
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AA seq
282 aa
AA seq
DB search
MLQSNQEGQNSSILIREVWASNLAYEFYLIRGVVGRYPFISMDTEFPGVIHSPQVDAPNP
SRRRQLHPIDCYRYLKANVDDLKLIQVGLTLTDADGNLPQFGTNQGYIWQFNFCDFDPAR
DHHNPDSIDLLRRQGIDFNSNISHGIDSVHFGEMLMNSGLVLNKAVTWVTFHSAYDFGYL
VKILTRQNLPDRLEDFLYVLRMFFGDNVYDIKHMIRFCNALYGGLERVASTLNVDRAVGK
SHQAGSDSLLTWHAFQRMMNVYFVDSEAHQHAGVLFGLEMTV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagtccaatcaagaaggtcaaaattcatcgattttgattagagaagtctgggct
tccaatttagcctatgagttctatcttattcgaggagttgttggcagataccctttcata
tccatggatacggaatttcctggagttattcattcacctcaagttgacgcccctaacccc
tctcgccgccgtcaacttcatccgatcgattgctatagatatttaaaggctaatgttgat
gacttaaaactcattcaagtcggtctcactttaacggacgctgacggtaacctccctcaa
tttggaaccaatcaaggttacatatggcagtttaatttctgcgatttcgatcccgctcgt
gatcatcataatccagattctattgacctactgcgccgtcaaggtattgatttcaatagc
aatatttctcatggtatagattctgtccattttggtgaaatgttgatgaactctggcctc
gtcttgaataaagccgttacttgggttacattccatagtgcctatgattttgggtatctc
gtgaaaattttgactcgacagaacttgcccgacagattggaggattttctatatgtttta
aggatgttttttggtgacaatgtttacgatatcaaacatatgattcggttttgcaatgct
ttgtacggtggactcgagcgggtcgccagtacattgaatgtcgatcgggcagttggaaaa
tcccatcaagctgggtcagatagtttattgacatggcacgccttccaaagaatgatgaat
gtctatttcgttgatagtgaagcccatcaacacgcaggagttctctttggattagagatg
acagtttag
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