Cicer arietinum (chickpea): 101496815
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Entry
101496815 CDS
T02819
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101496815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101496815
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101496815
Spliceosome [BR:
cam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101496815
Complex C
U4/U6.U5 tri-SnRNP related factors
101496815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
AAA_30
nSTAND3
T2SSE
AAA_16
Flavi_DEAD
Cas3-like_C_2
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101496815
NCBI-ProteinID:
XP_027192942
UniProt:
A0A3Q7YE71
LinkDB
All DBs
Position
7:59650752..59654408
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AA seq
899 aa
AA seq
DB search
MDLRKRSRTSAVEVEEKEREFKRITSSCNETKGSESVEEELLKDQREKEELEQHLRERES
ARTRKLTEPKASRTRSNAEDIQTLRKVSRHEYLKKREEKKLQELRDGIEDEQYLFDGVKL
SEAEYHDLRHKKAIYDVLSKKKGLEGANNEYKMPEAYDDQRGVNQEKRFSVAMQRYSDPN
AEKEEVWEEHQIRKATLKFGSKDKRQVCDDYQFVFEDQIDFIKAAVMDGDKFDYEEELAL
EKSKAKSSVLEALHEERKKLPIYPFRDEFLKAVHDHQVLVIVGETGSGKTTQIPQYLHEA
GYTKNGRMIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDG
MLLREFLAQPELESYSVVMVDEAHERTLSTDILFGLVKDVARARPDLKLLISSATLDAEK
FSNYFDCAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTTLQIHATQPPGDILVFLTGQE
EIETTEEILKQRMRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVILATNIAET
SLTIDGIKYVIDPGFSKMKCYNPRTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYT
AYSFQNDLDDNTPPEIQRTNLANVVLTLKCLGIEDLINFEFMDPPPIDAIKKALELLYAL
SALNVGGKLTKVGRRMAEFPLDPMLSKMIVASEKYKCSDEVISIAAMLSVGNSIFYRPKD
KQVHADNARMNFHTGNIGDHIAHLKVYNSWKENNYSTQWCYENYIQVRSMKHARDIRDQL
AGLLERVEIELTSNSNDFDAIKKSITSGYFPHSARLQKNGTYRMVKHQQTVHIHPSSGLA
EILPRCVLYHELVLTSKEYMRQVTEIKPQWLLEIAPHFYDLKDVENSSSNKMPRGHGLA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaggaagagaagtagaacaagtgcagttgaagttgaggaaaaggagagggaa
tttaagagaataacttcttcctgtaatgaaacaaagggttcagagtcagtagaagaagaa
ctgttgaaagatcaaagagagaaggaggaactagagcaacatttgagagaaagagagtca
gcgagaacacgcaaattgactgaaccaaaggcaagtcgaacaagatctaatgcagaggat
attcaaacattgagaaaggtttcaaggcacgagtacttgaagaaaagggaggaaaaaaaa
ttacaagaactcagagatggcattgaagatgagcaatatctatttgatggagttaagctt
tcagaagcagaataccatgatcttaggcacaagaaagctatatatgacgtactttcaaag
aagaaggggctagaaggggcgaataatgaatataaaatgccagaagcttatgatgatcag
cgtggtgttaatcaagaaaagaggttttctgtggcgatgcaacgttacagtgatccaaat
gctgagaaagaagaggtctgggaggaacatcaaattagaaaggcaacactgaaatttggt
tcaaaagataaaagacaagtttgtgacgattatcaatttgtgtttgaggatcaaattgat
tttatcaaggcagcagtgatggatggagataagtttgattatgaagaagagcttgcattg
gaaaaatccaaagctaagagttcagttttagaggcacttcatgaggagagaaaaaagcta
cctatctatccttttcgggatgaatttctcaaagctgttcatgatcaccaagtacttgta
attgttggtgaaactggttccggaaagactacacagattccccaatatctccatgaagct
ggttacacaaagaatggaagaatgattgcatgtactcagccacggcgtgttgctgctatg
agtgttgctgcccgagtttctcaagagatgggtgttaaactaggacatgaggttggttac
tccatacgttttgaagattgcacgtcagagaagactgttctgaaatatatgacagatgga
atgttgttgagggaattccttgcccagcctgagctggaaagttatagtgttgtgatggtg
gatgaagctcatgaaagaacactttcaactgatattttatttggattagttaaggatgtt
gctcgtgcacgacctgatcttaagttgttgatatcaagtgctactcttgatgcagagaag
ttcagtaactattttgattgtgctccaattttcaaaattccagggagacggtatcccgtt
gaaatacacttcaccaaagcaccagaagctgactacttggatgctgctattgtcacgacg
cttcagatccatgccactcaacctcctggagatatattggtattccttactggtcaggaa
gaaattgaaacaacagaagaaatcctgaagcagcgaatgagaggcttggggactaaaata
gctgagttgataatatgccctatatatgccaacctgccaactgaactacaggctaaaata
tttgagcccacacctgaaggggctagaaaggttatccttgccaccaatattgcagaaact
tcattgacaattgatgggatcaaatatgtcattgatccaggattttctaagatgaaatgt
tataatccaaggactggaatggagtctttactagtcactcccatctcaaaagcttcagca
atgcaaagagctggtcggtctggaagaacaggtcctggtaaatgcttccgattgtatact
gcatacagttttcaaaatgatttggatgataacactccacctgaaatacaacgaacaaac
cttgctaatgtagtcttaactttaaaatgtcttggtattgaagacttgattaattttgaa
tttatggatcctccaccaattgatgccataaagaaagctttggagcttttatatgcacta
agtgctttaaatgtgggtggcaaattaactaaggtaggcagacggatggcagagttccca
cttgatcctatgttgtcaaaaatgattgttgcttcagaaaagtacaagtgttctgatgag
gtaatctccattgctgccatgctttctgttggcaactcaatattttaccgtccaaaggat
aaacaagtacatgcagacaatgcaagaatgaattttcacactggaaatattggtgatcac
atagctcatctgaaggtctataattcatggaaggagaacaattattcaacacaatggtgt
tatgagaattatatacaggtaaggagtatgaaacatgctagggatatccgtgatcaactt
gctggtctattggagagggttgagattgaactaacttcaaattccaatgactttgatgcc
atcaagaagtccataacatctggatatttcccacactctgcccgactacaaaagaatggt
acttatcgaatggttaaacatcaacagactgttcacatacatcctagttcggggctggca
gaaattcttcctagatgtgttttatatcatgaactagtactcacatccaaggaatatatg
agacaggtcacagagataaagcctcaatggttgttggagatagctccccacttttacgac
ctcaaggacgttgaaaactccagttccaacaaaatgccccgtggacatggacttgcatag
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