KEGG   Cicer arietinum (chickpea): 101496854
Entry
101496854         CDS       T02819                                 
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03018  RNA degradation
cam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101496854
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101496854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101496854
   03041 Spliceosome [BR:cam03041]
    101496854
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101496854
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101496854
Spliceosome [BR:cam03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101496854
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 101496854
NCBI-ProteinID: XP_004495970
UniProt: A0A1S2XZ78
LinkDB
Position
4:complement(7709376..7711669)
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEESKTRTDRKPPGVGRGRGRGREDGAPGRQVKGIGRGFEE
GGAKGPGGGRGRSGPGGKPGGNRGAGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgttgccactttcccttctcaagactgctcaagggcaccctatgctggttgaactgaaa
aatggggagacatataacggccatttggttaattgtgatacatggatgaacatccatctc
agagaagtcatctgtacctctaaagacggagatagattttggcgtatgcctgaatgctac
attcgtgggaatactattaagtaccttcgagttcctgatgaggttattgacaaagtccag
gaagaatccaagactcgaactgatcgcaaaccacctggtgtgggacgcggaagaggaaga
ggtagggaggatggtgctcctggacgtcaagtaaaaggaattgggcgtggctttgaagaa
ggtggagctaaagggccaggaggaggccgaggcagaagcggcccaggtggaaaacctggt
ggaaacagaggtgcagggcgaggtagaggttga

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