Cicer arietinum (chickpea): 101496909
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Entry
101496909 CDS
T02819
Name
(RefSeq) uncharacterized protein isoform X3
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101496909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101496909
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101496909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_12
TPR_19
TPR_1
ARM_TT21
Coatomer_E
TPR_11
ANAPC3
DUF627
TPR_8
ARM_TT21_N
TPR_10
HEAT_Nup120
TPR_21
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
101496909
NCBI-ProteinID:
XP_004508458
UniProt:
A0A1S2YQR7
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Position
7:complement(6348202..6354598)
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AA seq
844 aa
AA seq
DB search
MESRDLTPSSPSSTATTELEDGGLTITVAMAKEAAMHYQSGNFDECLELLHQLLEQKPND
PKVLHNIAIAEFFRDGCSDPKKLLEVINNIKRKSEEHTLTSGDQGESVNSVGNKVTLGSK
GSNTSALQLHTDEFDSSIARLNIAVIWFHLHEYAKTVSILEPLFQKIEPIDEQTTALHVC
LLLLDASLACQDASKSADVLTYLERAFAVGNASQGDNGNTAQQQSANLITKSAPVTISES
ADPSSSDLGSSVNAPENHLSRTLSEDALDYEAMILDMGGQSLARSMGPSSNDLSRALVDK
FSTVDLKLKLQLYKVRFLLSTRNLKLAKREVKLAMNIARGRDSSMALLLKSQLEYARGNH
RKAIKLLMASSNNRTDTEFSIIFNNNLGCIYYQLGKYQTASFFFSKALTDCSSLRKEQQL
KLTTFSKDNSFLIIYNCGVQHLACGKPILAARCFEKASSVFYRQPLLWLRLSECCLMALE
KGLIKSCRVPSEKLEVGVCVVGFEKWRQLVVKDQIPGNGQVDSSKGNDCCPSEDGRLKLS
ISLARQCLLNALHLLDSYSTNRLKSSLPSNSSVENDTSEVPLSKNSNRKNLHGIDSKAFS
VAVGLGQVNSNGDTKEQKGGASQELFQNSLSYYEDLCRRENQLVKQAVLANLAYVELELD
NPVKALSAAKSLLELPECSRIYIFLGHVYAAEALCLLNRPKEAAELLSYYLSGGNNVELP
FSQEDCEKRVVERAVEFEEVNGGSTAAKNSSLQDTQSIIFLKPEEARAAIYANFAAMSAM
QGEFEKANILVTQALSILPNSPEATLTAVYVDLLLGKPQEALARLKSCSRIRFLPSETTS
NKSS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcgagatttgacaccgtcttctccgtcatcaaccgccaccaccgaactcgaa
gacggaggactcactatcaccgtcgctatggctaaagaagccgctatgcattatcaatct
ggtaacttcgatgaatgcctcgagcttttgcatcaacttttggagcagaaaccgaacgat
ccaaaggtccttcataatatagctattgcagaattctttcgagatggttgttctgatccc
aaaaagttacttgaagtaatcaataacataaagagaaaaagtgaagagcataccctgact
tctggggatcaaggagaatcagttaacagtgttggaaataaagttactttgggatccaaa
ggcagcaatacctcggcactgcagttgcatacagatgaatttgactcttctatcgctagg
ctgaatattgccgtcatctggttccatcttcatgaatatgcaaagacggtatcaatttta
gaacccctatttcaaaagattgaacccatagatgagcagacaacggccctgcatgtttgt
cttcttctgcttgatgctagccttgcttgccaagatgcatctaaatcagctgatgtgttg
acttatctggaaagagcatttgctgttggtaatgcgagtcaaggtgacaatgggaatact
gcacagcaacaatctgcaaatctaatcacaaagtctgcacctgtcaccattagcgaatct
gctgatccatccagttcggatttagggtcaagtgttaatgcacctgaaaatcatctatcc
agaactttgtctgaagatgcgcttgattatgaagccatgattttggatatgggtggacaa
agtttagccaggtcaatgggcccttcttcaaatgatctttcgcgggctttggttgataag
ttttctactgttgatttaaagcttaagttgcaactttacaaggttcggtttctgcttagt
actaggaacctgaagcttgcaaaacgagaagtcaaactggctatgaacatcgcacgtgga
agagattcatccatggctcttcttttgaaatctcaactagaatatgctcgtggtaaccac
cgcaaggcaataaagctattgatggcatcaagtaataataggacagacacagagttttca
atcatttttaacaacaatcttggttgcatttattatcagctcgggaaatatcagacggcc
tcatttttcttctcaaaggcactaactgattgttcgtccttgcgaaaggagcaacaatta
aagctgaccactttctcgaaggataattctttccttataatttataactgtggtgtgcag
cacttggcttgtggaaagccaatacttgcggctcgatgtttcgagaaggcaagttcggtc
ttctacagacagcctctcttgtggctccgactctcagaatgctgtctgatggctttggaa
aagggcctaatcaaatcatgtcgggttccttcagagaagttggaggttggagtttgcgtt
gttgggtttgaaaaatggaggcaacttgttgtgaaagatcaaattccaggtaatggacaa
gtggactcctcaaaagggaatgattgttgtcctagtgaagatgggcggctgaagttatct
atttcccttgctcggcagtgcctcttgaatgctctgcacttgctggactcctacagcaca
aatcgtttgaagtctagtttgccctctaattcttctgtagaaaacgatacaagtgaagtg
ccgctttcaaagaattcaaatcgtaaaaacttgcacggcattgattcaaaggcattttca
gtagcagtaggtttaggtcaggtaaattcaaatggggacacaaaagagcagaagggagga
gctagtcaggaactctttcagaactccctctcatattatgaagatctctgtagaagagaa
aatcaattggtcaagcaagctgttcttgctaatttagcatatgtggagctggaattggac
aatcctgtgaaggctctgtcagctgcaaaatctcttttagaacttccagaatgttccaga
atttacatctttctaggccatgtttatgcggcagaggctctttgcttgctgaacagacca
aaggaagctgctgagctcttatcatattatttgtctggaggaaacaatgttgaattgcca
ttcagccaagaggactgtgagaaaagggtagtggagagggctgttgaatttgaagaggta
aatggaggatccactgctgccaagaattcttctctccaggacactcaaagtatcattttc
ctcaagccagaggaagcacgagcagcaatttatgcaaactttgccgcaatgtctgcaatg
cagggtgaatttgagaaagccaatatattggttacacaggcattgtccatattaccgaac
agcccagaagctacattgactgcagtttatgtggatctcttgcttggtaagccacaggaa
gctctagccagactaaaaagctgtagccgtattaggttcctgcccagtgaaacaacttca
aataaatcttcttga
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