Cicer arietinum (chickpea): 101497519
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Entry
101497519 CDS
T02819
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101497519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101497519
03041 Spliceosome [BR:
cam03041
]
101497519
03036 Chromosome and associated proteins [BR:
cam03036
]
101497519
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101497519
Spliceosome [BR:
cam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101497519
Complex B
101497519
Complex C
U2 SnRNP specific factors
101497519
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
101497519
TFTC complex
101497519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
101497519
NCBI-ProteinID:
XP_073224004
LinkDB
All DBs
Position
4:17851050..17855816
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYNLTLQRPTGIVCAINGNFSGGKGQEIVVARGKVLDLLRPDDNGRIQTILSVEVFGA
IRSLAQFRLTGAQKDFIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGCRRIVPGQYI
AVDPKGRAVMVGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGMAASEAQKHLTFYELDLGLNHVSRKWSDQVDNGANLLVTVPGG
ADGPSGVLVCAENFVIYKNQGHQDLRAVIPRRADLPSERGVLIVSAAMHKLKNMFFFLLQ
TEYGDIFKVTLEHENDRVKELKIKFFXXXPATASMCVLKSGFLFAASEFGNHGLYQFKGI
GDDDDVEASSSRLMETDEGFQPVFFQPRKLKNLVRIDNVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRAR
FLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVVIESDQGAFTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDK
DDPLSDEHYGYPKAESDKWASCIRVLDPRTGTTTCLLELQENEAAFSVCTVNFHDKEYGT
LLAVGTAKGLQFTPKKSLIAGYIHIYRFLDDGKSLELLHKTQVDCVPVALTQFQGRLLAG
IGPVLRLYDLGKKKLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDLITCLQKASLIPGGGECILYGTAMGSIGALHAFTSRDDVDFFS
HLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcactcttcagcgacccaccggcatcgtctgtgccatcaatggc
aacttctccggcggcaagggtcaagaaatcgtcgtcgctagagggaaagttctcgatctc
cttcgccccgacgacaacggtcgcattcaaaccattctctccgtcgaagttttcggtgcc
attaggtcattagctcagttccgtctcaccggtgctcaaaaggattttatcgtcgtcggt
tccgattccggtagaattgttatcctcgactacaacaaagagaaaaacgtcttcgataaa
attcaccaagaaacttttggtaagtccggttgcagaagaattgttccaggtcagtatatt
gctgtagatcccaaaggtagagctgttatggttggtgcttgtgagaaacaaaaacttgtt
tatgttttgaatagagatactgctgctaggttaactatttcttcacctttagaggctcat
aaatcacacactcttgtttattccatttgtggtgttgattgtggttttgagaatcctatt
tttgctgctattgagttggattattctgaggctgatcaagattctactggtatggctgct
tctgaagctcagaagcatttgacattctatgagcttgatttaggtcttaatcatgtttct
agaaagtggtctgatcaggttgataatggtgctaatttgcttgttactgttcctggtggt
gcggatggaccaagtggggttcttgtttgtgctgaaaattttgttatttataagaatcag
ggtcatcaagatcttagggctgtgattccgagacgtgctgatttgccttctgagcgtggt
gttctcattgtatcggctgctatgcataaactgaagaacatgtttttcttccttttgcag
actgagtatggtgatatttttaaggtaacattggaacatgagaatgaccgtgtcaaggaa
ttgaagattaaattttttnnnnnnnnncctgctactgcttcgatgtgtgtgctcaagtca
ggtttcttgtttgcggcatccgagtttggaaatcatggtctgtatcagtttaagggaata
ggggatgatgatgatgtggaggcctcgtcttcaaggctgatggaaactgacgagggtttt
cagcctgtgtttttccagcctaggaaactgaaaaaccttgttaggattgacaacgttgag
agtttgatgccaattatggatatgaaggtcagtaatctgtttgaagaggagactcctcaa
atttttactctttgtgggcgtggacctcgatcttctctgaggatcttgagaacaggtttg
gcagtcagtgagatggcagtttctaagcttcctggtatacccagtgctgtttggactgtg
aagaagaatgttattgatgagtttgatgcctatattgttgtgtcgttcactaatgccaca
cttgtgctttccattggtgagacagtcgaagaagtcagtgacagtgggtttctggacact
actccctctcttgctgtttctttgataggtgatgattctctcatgcaggttcatccaaat
ggtattaggcatattagggaggatggccgtattaatgagtggagaactcctggaaagagg
acaattgccaaagttgggtcgaatagacttcaggtggttattgctctaaatggaggggag
cttatatattttgaagtggatgtaactggtcagttgatggaggttgagaaacacgaaatg
tctggcgacgttgcttgtttggacattgctccagtgcccgaaggcagacaaagagcccgt
tttcttgcagttggctcatatgacaagacaatccgaatcttatcactggatcccgacgat
tgtatgcagactctaggtatacaaagtctttcttcagctccagaatctcttcttttcctt
gaagttcaagcatcggttggtggtgaggatggcgcagatcatcctgctagtcttttcctg
aatgctggtttacagaatggtgtcttgtctagaactgtggtggatatggtcacaggcctg
ctttctgatacccgttctcgattcttaggattgagagcccctaagctgtttcccattatt
gtaagaggcaagcgcgctatgctctgcttgtcaagtcgcccttggcttggttatattcac
caaggacacttccttttaacacccctttcatatgaaactcttgaatatgctgcgtcattt
tcatcagaccaatgtgtggaaggtgtagttgctgttgccggtgaggctttgagaattttt
accattgaaagattaggagaaacatttaatgagacagttattccacttagatacacgcct
aggaaatttgtgctgcaacccaaacggaaacttttggtggtgattgagagtgatcaagga
gcatttactgcagaagagcgtgaagctgcaaggaaagagtgttttgaggctgctcaagct
ggagaaaatgggacaggaagtgcagaccaaatggaaaatggtggggacgacgaggataaa
gatgatcccctctctgacgagcattatggctatccaaaagctgaatcagataagtgggca
tcgtgcatcagagttcttgatccgaggacaggaactacaacctgtcttttggagcttcag
gagaatgaggctgcattcagcgtatgcacagtaaattttcatgataaagaatacggaact
cttttagctgttggcacagctaagggactgcaatttactcccaaaaagagtttaattgct
gggtatattcatatatataggtttctagacgatggaaagtctcttgaacttcttcacaaa
actcaggttgactgtgttcctgttgctctaactcagtttcagggaagattacttgctgga
ataggacctgttctcaggctatacgatctggggaaaaaaaaattattaagaaagtgtgag
aataagctattccccaacacaattgtctctattcatacctaccgtgatcgaatttatgtc
ggtgacatccaagagtctttccattactgcaagtatagacgggatgaaaaccaactttac
atatttgctgatgattgcgttccaagatggcttactgcatcataccatatagattttgac
accatggcaggtgcggacaagtttggaaatatctattttgtgcggttgccgcaagatgta
tctgatgagatagaagaagatcctactggtgggaggatcaagtgggagcaggggaagctg
aatggagctcccaataaggtggaagaaattgtacaatttcatgttggtgatttgatcaca
tgcctgcaaaaggcctctcttataccaggtggtggagagtgcattttatatggaacagct
atgggaagcattggggcattacatgcttttacttcacgagatgacgttgatttcttttct
catttggagatgcatatgaggcaggataatccacctttgtgtggaagagatcacatggct
tatagatctgcctattttcctgttaaggatgttattgacggggacctatgtgagcaatac
ccgacattgccaatggatttgcagagaaaaattgctgatgagttggacaggacccctgga
gaaatactgaagaaactcgaagaagtacgaaataagattatttaa
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