Cicer arietinum (chickpea): 101498356
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Entry
101498356 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101498356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101498356
03036 Chromosome and associated proteins [BR:
cam03036
]
101498356
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101498356
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101498356
mRNA degradation factors
5'-3' decay
Decapping complex
101498356
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101498356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
TFIIA
Motif
Other DBs
NCBI-GeneID:
101498356
NCBI-ProteinID:
XP_004492712
UniProt:
A0A1S2XPZ2
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All DBs
Position
3:complement(60882491..60888050)
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AA seq
499 aa
AA seq
DB search
MNNRARYPPGIGLGRGGGGGLNSNPGFQQRPQQQQYVQRHMMQNQHPQHYQQNQQYQQQQ
QQQQQQQWLRRNQLGGTDTNVVEEVEKTVQSEAADPSSQDWKARLKIPPPDTRYRTEDVT
ATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC
IPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL
YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPSNRQ
ILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKL
QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD
LFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQE
LGTEIKQIPPFIDQAIYCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatagagcgagatacccacctgggattgggttagggcgaggtggtggtggtggt
ttgaactcgaaccctgggtttcaacagagaccacaacaacaacagtatgtgcagagacac
atgatgcagaatcagcatccgcaacactaccagcagaatcaacagtatcagcagcaacag
cagcaacaacagcagcagcagtggttgagaaggaaccagttgggtggtactgacaccaac
gttgttgaggaggttgagaagactgtacagtctgaagcagccgaccctagttcacaagat
tggaaggcaagactaaagattccaccacctgatactcgctataggacagaggacgtgaca
gcaactaaaggaaatgagtttgaggattactttttgaagcgtgagctgctaatgggaata
tatgagaagggctttgaaaggccatcccctatccaagaagaaagcattccaattgccctt
actggtagtgacattcttgctagggctaaaaatggaactggcaaaacagctgcattttgc
attcctgcattggaaaaaattgatcaggataataatgttattcaagttgttatactggtt
ccaacacgagagttggctttgcaaacatctcaagtgtgtaaagagcttggaaagcatttg
cagattcaagttatggtcacaactggtggtaccagtctaaaagatgacattatgcgttta
tatcaacctgttcatctgctagttggtactccaggaagaatattggatcttgcaaagaag
ggtgtctgtgttctgaaagattgttccatgcttgtcatggatgaggctgataaactcctc
tccccagagttccagccttcaatagagcagctgattcaatttcttccctcaaaccgtcaa
atcctgatgttttcagctacgtttcctgttactgtaaaggacttcaaagatagatatctt
cgtaagccatatatcattaaccttatggatgagctaactctgaagggtattacacaatat
tatgcatttgtggaggagaggcagaaagtccactgcctaaatactcttttctctaagctg
caaataaaccagtcaatcatcttctgcaattcggtgaatcgggttgaactccttgccaag
aaaatcacagaactagggtattcatgtttctatattcatgcgaagatgttgcaagaccac
cgtaatagagtttttcatgactttcgcaatggtgcctgcaggaatcttgtttgtactgat
cttttcactaggggaattgatatccaagcagtgaatgttgttattaattttgattttccc
aagaactcagaaacatatctgcacagggttggtcgatcagggaggtttgggcaccttggt
ttagcagtgaacttgataacctatgaggatcgtttcaatttgtataggattgaacaagaa
cttggcactgaaataaaacaaattcctccattcattgaccaggctatctattgtcggtga
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