Cicer arietinum (chickpea): 101498611
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Entry
101498611 CDS
T02819
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101498611
Transcription machinery [BR:
cam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101498611
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GPW_gp25
Motif
Other DBs
NCBI-GeneID:
101498611
NCBI-ProteinID:
XP_004498453
UniProt:
A0A1S2Y3Z8
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Position
4:complement(58159804..58164735)
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AA seq
545 aa
AA seq
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MGLCFRFRLNTKLHSPHFFTSSTIFLSSSSSAGGREVFFNPTRLSLLSTVYEEGETLQKD
FGKTFAFSSSALEVPEMDLLQGEVTKVNKGKRSLSSVHEIIDNTQLPFGEPHFGLLMENL
GILEETFADSEAMRLEKDIVLKLEKLGALELFNVCLTRSFGTSTESNCTDVVLEHVKEKK
RNFKVDNYTGKVVVQSKRKENRTRRKQASVAITTSFQSLPLEDNNQEGPLRLPASLVKRV
SNTNNRRAVIAQREVEMSKGVKVLAELEKMKTAIEEDTKQAVSLSSWAEASGVDENVLQR
QLYHGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERFDSTRGYRF
STYVQYWIRKSMSRMVARYARGITIPWSMNKAISQIQKARKLLKSTSMKYPDDHEIAKMT
GLSLDRIRSASHCMRIVSSMNQKMGDRGIEYMGYMADMSIESPEETVMKQHIRKDIHDIL
QSLDSRERQILILRFGLNDHQPKSLEYIGKIYKVSKEWIRKIEKKALTKLRNEANTSKLN
YYLDL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctgtttccgttttagactaaacacaaaactccactctcctcatttcttcacc
agttctactattttcctctcttcttcatcttctgctggaggcagggaagtttttttcaac
cctacaaggctatctttgctttcaacagtttatgaggaaggagaaactttgcagaaggat
tttggaaagacatttgcattttcgtcatcagcattggaagttccagaaatggatttattg
caaggagaagtaacaaaggtaaataaaggaaagaggtcacttagtagtgtgcatgaaata
attgataacacgcaattaccttttggggagccacattttggtttgttaatggagaacctt
ggcattttagaagaaacttttgctgattctgaagcaatgaggttggaaaaggacattgta
ttgaaactagaaaagctgggagctcttgagttgttcaatgtttgtctaacaagatctttt
ggaacctcaaccgaatcgaactgcaccgatgtagttcttgaacatgtcaaagagaaaaag
agaaacttcaaagtagataactatacgggtaaagttgttgtccagtctaagagaaaggaa
aatagaacaagaagaaagcaagcatcggttgccataacaacttcctttcagtcgttgcct
ttagaagataataatcaagaaggtccattacgtttgccggcttctttagtaaaaagagta
tcaaatactaacaatagaagagcagtgattgctcaaagggaggtggaaatgtcaaaaggt
gtaaaggttctagcagagttagagaaaatgaaaacagctatagaagaggataccaagcaa
gcggtaagcttgagtagctgggcagaagcatctggagttgatgagaatgtgctgcaacgg
caactatatcatggctattactgtcgagatgaattgatacggagtactcgttcgttagtt
ctatactttgccagaaaatacaggggtatgggaatagctttggaagatttgcttcaggta
ggatatataggcgttctccaaggagccgagcgatttgacagtacaaggggataccgattc
tcaacctatgtgcagtactggataaggaaatcaatgtcaagaatggtggcacgatatgct
cgaggaatcactattccttggtcaatgaacaaggcaataagtcagatacaaaaagcacga
aaactcttgaaaagtacgtccatgaaatacccggacgatcatgaaattgcaaagatgaca
ggtctttcactggatagaatcagatcagctagccattgtatgagaatagtttcttcaatg
aatcagaaaatgggggatcgtggtatagaatacatgggttatatggccgatatgtcaata
gagagtcctgaagagactgtcatgaaacagcacattagaaaagacatacatgatatcctc
caaagcttggattcaagggaaaggcaaatactcatcctacgctttggccttaatgatcac
caacccaagtctcttgaatatatagggaagatttacaaagtcagcaaagagtggataagg
aaaatagagaaaaaagctctcacaaaactacggaacgaagcgaacacctcaaagttgaac
tattatttggatctgtag
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