Cicer arietinum (chickpea): 101499438
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Entry
101499438 CDS
T02819
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101499438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101499438
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101499438
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101499438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
101499438
NCBI-ProteinID:
XP_073219957
LinkDB
All DBs
Position
7:62326220..62349227
Genome browser
AA seq
2407 aa
AA seq
DB search
MTLGSSRSMANFSSIASNQIRFLLNSFNQLNFDSVFHQLSQFTEFGTVGCILLLRTCLDH
FSYGRRDTKDMQHEPILAAVVKFLLNKPNFSTVISESMKNVVVNESFLGSFCNGLQLSLS
EKIAISLALSDSENPDARLCGKNFCMTQIEELHANPGSLSCHEQIHSVIMFLKQSEGLSE
HVDSFMQILSLVQVKDTPPFVLTPLLPDEMHGAKFLKWNTEFFHDREEDDFDAILADIQK
EINMGDMVKELGYGCTVDVSQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLT
FGATLGYNNLTELPPLNSWNIDVLIDTVNSLSPQTNWVRVFENLDHEGFYLPSEEAFSFL
MSVYKHACKEPFPLQAICGSVWKNTEGQLSFLKYAVSAPPEMFTFAHSARQLAYADAING
HKLQNGHANHAWLCLDLLDVLCQLAEKGHASVVWSILDYPLTHCPEILLLGMAHVNTTYN
LFQREVSLTVFPMIVKSDVGSGMILHLWHINPNLVLRGFMDSQNDDVESITRIVDICQEL
KILSPVVEIIPSYYSIRLAAVASRKEIIDLEKWLSNNLITYKDAFFEECLKFLKEVQAGR
SQNLSGQSLRQPGGVLNLCTETTATFLKVLKSHTDLVTSRLLSEELEKLHISITDSNQRL
QNSGTTDSSASSGYPKDVEIEASFDFQEMFHDRLPVTTVVQKLVQYKESSVKREKMVFEC
MIANLFEEYKFFPKYPEMQLKIAALLFGSFIKHQLVTHLSLGIALRYVLDALRKPADSKM
FLFGSLALEQFVDRLIEWPQYCNHILQISHLGSTHSEIVAFIEQALARISSGRTDVEGMG
HASVISSHTSAPATLGHLEQLSGSTGQQHLSLQQRRENPLDDRHKTSVGSSTDMKPPLAS
LGQSPVITQADASTANKLHSTVSASSMLSSSPGFVRPSRGATSTRFGSALNIETLVAAAE
KRETPIEAPGSEVQDKISFIINNISSTNIEAKAKELTEILKEQYYPWFAQYMVMKRASIE
PNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSAEERSLLKNLGSWLGKL
TIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILG
LLAEIYSMPNLKMNLKFDIEVLYKNLVVDMKDVTPTSLLKDRTREIEGNPDFSNKDVGAS
QSQMISDIKSGLVPPVNQVELPLEVTNPSNSGAHPHILSQYGSLHLSAGTLMEDEKVTPL
GLSDQLPSAQGLLQANTTPAPFQLPTQIHNIGTHVIINPKLSGFGLQIHFQRAVPIAMDR
AIKDIVSSIVQRSVSIATQTTKELVLKDYAMESEEKRIKNAAHLMVASLAGSLAHVTCKE
PLRASISKELRTSLQSLNISSDILEQAVQLVTNDNLDLGCAVIEHAATDKAINTIDTEIS
HQLSLRKKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQN
LSNQASHSMSAGVAVQPANSGLTGTNGPVSGQINPGYSLNTGYDGVARPMDDIPESNFAP
HFSASSINVRAADNVSQHSIEKDSVASFPSTASTPELHTVDSADAVKESGASSQPLVSSG
AVERMGSSFLEPSLTTRDALDKYQIVAQKLEALVNNDSREAEIQGVISEVPEIILRCVSR
DEAALAVAQKVFKGLYDNASNNVHVCTYLAILTAIRDVCKLAVKELTSWVIYSEEERKYN
KDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVVEEPKVISELHNLI
DALAKLATKPGYPESLQLLIDMIKNPAALSASNAGKEDKARQSRDNKGPGLLVANKEELN
IVESAEPDPAGFREQVSMLFAEWYRICELPGASDTASTHFVVQLHQSGLLKGDDMTDRFF
RLLMEIAVAHCLSTEVINSGALQSSQQMPSMSFLAIDIYAKLVFSILKFVGFLGQGSSKL
FLLTKILGVTVRFIIKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILNNFA
TALHSLQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRH
AELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMR
LPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQSSPFLSELKEK
LLLSPNEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFTLAVFSVGAAL
DIFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVL
LERLIVNRPHPWGLLITFIELIKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDE
SMVSGWV
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgactctcggctcctcgcgaagcatggccaacttttcctccatagcttccaatcaaatt
cgcttcctcctcaactccttcaaccaactcaactttgactccgttttccaccaactctct
cagtttactgaatttggaacggttggatgcattttgttgcttcgaacttgcctggatcac
tttagttatggcagacgagataccaaagatatgcaacacgagccaattcttgcggcagtt
gtcaagttcctcttgaacaaaccaaacttcagtacagtgatttctgagtcaatgaagaat
gtagtagttaatgaaagctttttaggaagcttttgtaatggattgcagttatctttatcg
gaaaagattgccatcagtctggctttatctgattctgaaaatcctgatgccaggctatgc
ggcaagaatttttgcatgactcagattgaagaattgcatgccaatcctggttctttgagt
tgccatgagcaaattcacagtgttatcatgttcctcaagcagtctgagggtctttccgag
catgtagattccttcatgcagatattatcgctggtgcaggtcaaggacaccccacctttt
gttttgacccctttactacctgatgagatgcatggggctaaatttttaaagtggaatacg
gagttcttccatgaccgtgaagaagatgattttgatgctattttggcagacatacagaag
gaaataaacatgggagatatggtgaaggaactaggctatggatgcacagttgatgtctca
cagtgcaaggaaatattgtcactcttcttacctttaacggataatatgctctcaaagtta
cttggtgctattgcacgcacccatgctgggctagaggataaccagagcacattcttaact
ttcggcgcaacccttgggtacaacaacttgactgagttaccaccactgaactcttggaat
attgatgttttgatagatacggtcaatagtctttcaccacaaaccaattgggtccgggtg
tttgaaaatcttgatcatgaaggattttaccttcctagtgaagaagcattctcttttctt
atgtctgtgtataagcatgcctgtaaggagccatttccgctccaggccatctgtgggtct
gtttggaagaatactgagggtcagctatctttccttaaatatgctgtatcagcaccacca
gaaatgtttacttttgcacactctgcaaggcaactggcatatgctgatgcgattaatggg
cacaaacttcaaaatggacacgcaaatcatgcatggctgtgtcttgaccttttggatgtc
ctctgccagctagctgagaagggtcatgccagtgttgtttggtccatccttgattatccc
cttactcactgtccagaaatcttgctgcttggaatggcacatgttaatactacttacaac
ctcttccagcgagaagtatctctaactgttttccccatgatagtaaaaagtgacgtcggc
agtggaatgattctgcacctttggcacattaatcccaatcttgtcctgcgaggctttatg
gattctcaaaacgatgatgtagaaagcattacgagaattgtggacatctgccaagagctt
aagattctatcaccagtggtggaaattattccctcttattatagtataaggttagcagct
gttgcttcaaggaaagaaattattgaccttgagaagtggttgagtaacaacttaattacg
tacaaggatgccttctttgaggagtgccttaagttcttgaaggaagtccaagctggcaga
tcacaaaatctatccggccaatctcttcgtcagcccggtggtgttctgaatctctgtact
gagacaactgctaccttcttaaaggttctcaaatctcatactgacctggttacctcccga
ctactttctgaggagctggagaagttgcatatatctattacagattcaaatcaaagactt
caaaatagcgggactactgattcatctgcttctagtggctatcccaaagatgttgaaata
gaagcaagctttgacttccaggagatgtttcatgataggttacctgtcactactgtggtg
caaaagcttgtccaatacaaggaatcttctgttaagagggagaaaatggtttttgaatgc
atgattgcaaacttgtttgaggagtataagtttttcccgaagtatcctgaaatgcaactc
aaaattgctgcacttctctttggttctttcatcaaacatcagcttgtgactcatctctct
cttgggatagctctacgttatgttcttgatgcattgcgcaagcctgcagattctaaaatg
tttttgtttggaagtttggcgttggagcagtttgtggatcgtcttattgagtggccccag
tactgcaatcacattctgcaaatttcccatttgggcagcacacattcagaaatagttgct
ttcatcgaacaggctctcgctaggatttcctctggtcgtacagatgtagaagggatgggc
catgcttccgttatcagtagccatacttctgcaccggctacattaggtcatttagagcag
ctcagtggctctactggacagcagcatttgtcactgcagcagaggcgtgaaaatcctttg
gatgatcgtcacaagacctctgttggttcatccactgatatgaaaccaccattggcttct
ctagggcaatctccagtgattacacaggctgatgcttctactgccaataagttacatagc
acagtcagtgcctcatcaatgttatcttcttctcctggttttgtccgtccttcccgggga
gctacttctacgaggtttggatctgccctgaacattgaaactttggttgctgctgctgag
aaaagagaaactcctattgaggctccggggtcagaggttcaggataagatatcatttata
attaataatatctcttctactaatattgaagccaaagcaaaggagttaactgaaattttg
aaagagcagtactatccatggtttgcacagtatatggttatgaaaagagctagcattgag
ccaaatttccatgacctgtacctgaaattccttgacaaagttaattcaaaggccttgaac
aaagagattgtccaggcaacatatgaaaattgcaaggttcttttaggatcagaactcata
aagtcaagtgcagaagagcgctctttgcttaaaaatcttgggagctggcttggaaagctg
acaattggacggaatcaggttctgagggctcgtgaaatagatccaaaatctttgattata
gaggcatatgagaaggggctgatgattgctgttattccatttacttcaaaggtccttgaa
ccatgtcaaagcagtcttgcatatcaaccccctaatccttggacaatgggcattttaggg
ttgcttgctgagatttattcaatgccaaacttgaaaatgaacctcaagtttgacatagag
gttttatacaaaaatcttgtcgtagatatgaaggatgtcacaccaacttctctcctgaag
gatcgtacaagagaaattgaagggaatcctgatttctcaaataaagatgttggggcatcc
caatcacaaatgatttctgatataaaatctggccttgttcctccagtaaatcaagtagag
ctaccacttgaagtcacaaatccatccaatagtggggcacatccacatatcctgtctcag
tatggttctcttcatctttctgcgggaacattgatggaagatgagaaagtgacaccgctg
ggcttgtccgatcaactgccttctgctcaaggactgctacaagcaaatactaccccagca
cctttccagctcccaacgcagatacataatattggaactcatgttattattaatccaaag
ctcagtggttttggtttacagatacattttcaaagagcggtacccattgcaatggacaga
gccatcaaagatatagtgtccagtattgtgcagcgtagcgtttctatagcaacccaaacc
acaaaagaacttgttttaaaggattatgctatggaatcagaagagaaacgtattaaaaat
gctgcacacttgatggttgctagtctggctgggagtttggctcatgtgacttgcaaagaa
cctttacgggcatcgatatcaaaagaactgaggacatcacttcagagtttaaatatttca
agtgatattttggaacaggctgtgcaacttgtcaccaatgataatctggatctcggctgt
gcggtaattgaacatgccgctaccgacaaggcaataaacaccatcgatacagagattagt
catcaactttctttgagaaagaagcatcgagaaggtatgggttctacgttttttgatgca
aacttgtatccacaaggttcaatgggtggtgttccagagcccctccgccccaaacctggt
cagttgtccctgtcacaacagcgtgtctatgaggactttgttcggcttccctggcaaaac
ctgtctaaccaggcctcacattcaatgtctgctggtgttgctgttcaacctgctaatagt
ggtctcactggcaccaatggtcctgtatctggacagataaaccctggttactccctaaac
acaggatatgatggggtcgctcgacctatggatgatatcccagaatctaattttgctcca
cattttagtgcttcctcaattaacgttagagcagctgacaatgtttcccaacatagtatc
gagaaagactcggttgcctcattcccttcaactgcttccacccctgagttgcacacagtg
gattctgcagatgctgtgaaagaatctggagcttcttcacagccactggtttcgtcaggt
gctgtggagcgcatgggaagtagcttcttggaaccgtctctcactacaagggatgctctg
gataaataccaaattgttgcacaaaagttggaagccttggtcaataatgattcgagggaa
gcagaaatacagggtgtcatttctgaggtacctgagatcatactcagatgtgttagtcga
gatgaggcagctttagctgtggctcaaaaggttttcaagggtttatatgacaatgcttca
aacaacgttcatgtctgtacttatcttgcaatcctgactgctattcgtgatgtttgcaag
cttgctgtgaaagagcttactagttgggtaatatactcagaagaagaaaggaaatataat
aaagatattactgttggtctcatccgcagtgaactgctaaatctaaccgagtataatgtt
catatggctaaacttattgacgggggaagaaacaaggctgctacggagttttcaatctct
cttcttcaaaccctggtcgtcgaggagccaaaagttatttcagaacttcacaatcttatt
gatgctttggcaaagcttgctacaaagcctggataccctgaatcgttacaactacttatt
gatatgatcaagaatcctgctgctctatctgctagtaatgctggaaaggaggataaggcg
aggcaatctagagacaataagggtcctggtctgcttgttgcaaacaaggaagagttgaac
attgtagaatctgccgaacctgatcctgctggattccgtgagcaggtgtccatgttgttt
gctgaatggtataggatatgtgaacttcccggtgccagtgatacagcttctacccacttc
gtcgtacaattgcatcagagtggtttgcttaagggggatgacatgacagaccgttttttc
cgcctgttgatggaaattgcagttgcacattgcttatccactgaggttattaattcaggg
gcactgcaatcttcccagcagatgccgtcaatgtcctttcttgcaattgatatttatgcg
aagcttgtcttctctatcttgaagtttgttgggtttttgggacagggatcaagcaagctc
tttcttctcaccaagattctgggagttactgttagattcattataaaagacgcagaggag
aagaaggtttcttttaatccaagaccatttttcagattgttcatcaactggcttctagat
cttggttcacttgagcctgttactgatggtgcaaatctccagattttgaataattttgcc
actgcattgcattctctacagccactcaaagttcctggtttcagttttgcctggctggag
ttggttagtcataggagcttcatgccaaaaatgctgactggtaatggtcaaaaaggttgg
ccttatatccaaaggttgcttgtagatttgttccaatttatggagccttttctgaggcat
gccgaactaggagatccggttcgtgttctctataaaggcacacttagggtgctcttagtg
ctacttcacgacttcccagagttcctatgtgactatcactttaccttctgtgacgttatt
cctccaagttgcatacagatgcgaaatattattctaagtgcatttcctcgtagtatgagg
ctgccagatccttcaactccgaatttgaagattgatttgctgcaagaaataactcaatcc
cctcgtattctttctgaggttgatgcagcactcaaagcaaagcagatgaaggctgacgta
gatgaataccttaagacaaggcaacagagttctccatttttatctgaactaaaggagaag
ctacttctctcacccaatgaagctgcctctgctggcactcgttacaatgtgccattaatc
aactcccttgtactgtatgttggaatgcaggcaatccagcagctccagggacgaactccc
catgcacaatcagcagcaaatgcattcacgttggctgtattttctgttggtgctgctttg
gatattttccagacactaattgttgacttggacacggaagggcgctacctcttcctaaat
gctgttgctaaccaactacgatatcccaatactcacacacactacttttccttcatcctc
ctttacttgtttgcagaatcaaaccaggaaattatccaagaacaaattactagagtcttg
ctagaacgcctaatagtaaatcgacctcatccctggggcctcctcattactttcattgag
cttatcaagaatctaaggtataatttctggaaccggtctttcatacgatgtgcaccagag
atcgaaaaactttttgaatcagtgtcaagatcttgtggaggtccaaagccagtggatgag
agtatggtctcgggttgggtatga
DBGET
integrated database retrieval system
