KEGG   Cicer arietinum (chickpea): 101499964
Entry
101499964         CDS       T02819                                 
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03022  Basal transcription factors
cam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101499964
  09124 Replication and repair
   03420 Nucleotide excision repair
    101499964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cam03021]
    101499964
   03400 DNA repair and recombination proteins [BR:cam03400]
    101499964
Transcription machinery [BR:cam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101499964
DNA repair and recombination proteins [BR:cam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101499964
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 VWA Zn_ribbon_GTF2H2 IBR
Other DBs
NCBI-GeneID: 101499964
NCBI-ProteinID: XP_012569253
UniProt: A0A1S2XRG4
LinkDB
Position
3:complement(66383336..66387483)
AA seq 422 aa
MNNIAGRPLNGVVVEDDDEDEANGDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIH
HAQYRRRLRALAATAATARIQKGLIRYMYIVVDLSKAASERDFRPSRMAVIAKQVEAFIR
EFFDQNPLSHVGLVTTKDGVAQSLTDLGGSPESHIKALMGKLECSGDASLQNALDLVHDN
LNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQET
GGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKT
GGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFVEISPSSQNDPSHN
FPNICFGCQESLLSHGNKPELSVSCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSVT
IA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaataacattgctgggagaccacttaatggagtcgtagtagaagatgatgatgaagat
gaggctaatggtgatggccttgaagcctgggagagagcttatacagaagatagatcttgg
gagtctttgcaggaggatgaatctggacttcttcgccccatagatactactgccattcac
catgcccagtatcgcaggcgccttcgtgctcttgctgcaacagcagctactgcacgaatt
cagaagggtttgatacgatacatgtacattgttgtagacctgtccaaggcagcttcagag
agggactttcggccaagtaggatggctgtgatcgcgaagcaggttgaggcatttatcagg
gagttctttgatcagaatccactaagtcatgttggtttggtcactacaaaagatggggtt
gctcaaagcttgacagatcttggtggcagtcctgagtcccacatcaaagctttgatgggt
aaactagaatgctcaggtgatgcctccctacaaaacgctctagatcttgttcatgacaat
ctaaatcaaatcccatcatatggtcatcgagaagttctgattttatattcggccctcagt
acatgcgatcctggtgatctcatggaaactatccagaaatgcaaaaagagtaaaataaga
tgctctgtcattggtcttgcagctgaaatgtttatatgcaagcatctttgccaagaaact
ggaggaacgtattcagttgcactagatgagtcccactttaaagagttaattctagagcat
gctccaccacctccagcaatagcagagtacgctactgctaatttaattaagatgggtttc
ccgcaaagagcagctgagggttctgttgcaatttgtacatgtcatgaggaggcaaagacc
ggagggggatatacttgtccaagatgcaaagttcgtgtctgtgagcttcctacagaatgc
cgcatttgtggattgacccttatttcttcgccccatttggcaaggtcgtatcatcatctc
ttccctatagtgccgtttgttgagatctctccatcgtctcaaaatgatccaagccacaat
tttcccaatatttgttttggttgtcaagaaagtcttcttagtcatggaaacaagcctgaa
ctttctgtctcttgtccaaaatgcaaacaacaattctgtcttgattgcgacatctacatt
cacgagagcttacataattgcccaggctgtgagagtttcaggcattctaagtcagttact
attgcctaa

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