Cicer arietinum (chickpea): 101501625
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Entry
101501625 CDS
T02819
Name
(RefSeq) endoribonuclease Dicer homolog 2 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cam03036
]
101501625
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101501625
microRNA pathway
RISC loading complex
101501625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Helicase_C
ResIII
PAZ
Dicer_dimer
Cas3-like_C_2
dsrm
SWI2_SNF2
Flavi_DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
101501625
NCBI-ProteinID:
XP_012570105
UniProt:
A0A1S3E2Y4
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Position
1:complement(7525956..7538112)
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AA seq
1196 aa
AA seq
DB search
MRWSQQNTDSINSSSKTMDDALMVIDDYDQLEIMPDTLSFARSYQLEALDKAIRENTIVY
METGSGKTLIAVMLLRSYAYHLRKPFPYIAVFLVPKVVLVSQQAEALKNHTDLKVGMYWG
DMGVDYWDEATWKVEMEKHEVLVMTPAILLSCLRHSFIKLNMIKVLIMDECHHAGGRHPY
ACIMTEFYHHQLRSGVSELPRIFGMTASPIKKAGNSEETLSKNIRELMTLMHSKVYTCLS
EAVISQFVPSSTLKFRYYKEKAISYRLFSELANKLNILKQQHELYVTSSDFTKSAADSAI
RKISKIFASSMFCLDELGIWLALKAAESLSLIEVETFLWGNSGDQIVKKFSSATILSLKS
YIPSDPQWTIGDNMNSDLDRGLLTSKVFCLIECLLEYSYRDFTEMRCIVFVERVITAIVL
ETLLNTLLPKYNSWRAKFIAGNSSQLQNQSRKIQNEIVEEFRLGLVNIIIATSILEEGLD
VQSCNLVIRFDPSPTVCSFIQSRGRARMQNSDYILMVKSGDSVTRSRLEKYLAGVEIMRK
ESLRQSSLPCERLESDRFHEEVYRVASTEAVVNLSSSITLVHLYCSRLPADGYFKPTPRW
DKETGTLYLPKSCPIHAIRVQGDTKFLKNIACLEACKQLHKIGALTDNLVPSIVVEEAEV
DEFGNEPYDEEQPSYVPFELVNRVLNNSNTTYYCYLIELKQNFSYDFTVQDIFLATRVEL
DPEIACMQFDMCFDRGSLDVNLKYKGSINLSPDQVLLCKRFQVNVLGILMDHKTDKGTVF
DECCLEDNLEVDYLLLPSIAIEERTDVDWLTINSIHPSKMECLHHEANIRTEKGFICACI
LKNALVCTPHNGRTYITTNIMELDGNSPLEVRDGEITTYKNYFEQKHGIQLRFDHQRLLK
ARHIFPVKNYCHGSRQVKERDVNKTFVELPPELCAIIMSPIPVSTLYSFSFIPSIMHRLE
SLLGAFNFKKLHLNHCPQNQIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYATSQQL
FNTYPDHHEGLLTVKRQKIICNAALCKLGCRGKLPGFIRNEPFDPKTWTIPGSRSKSSKL
KETVYKGTKIYTRGDRNLKRKIVADVVEALIGAFLTAGGEKAALLFMDWIGIKVNFNIMP
YERQLNAPENVVNVGFLESLLKYSFRNPSLLVEAMTHGSYMLPEVPTCYQVLTFCY
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggtcccaacaaaacactgactcaataaatagttcatcaaagactatggatgat
gctctgatggtaatagatgactatgatcagctggagatcatgcctgatactctttcattt
gctagaagttatcagcttgaagctttggataaagcaattcgtgaaaataccatagtgtat
atggaaaccgggtctggcaagaccttgatcgccgttatgcttcttcgaagctatgcttat
cacctccgaaagccgtttccttacattgctgtttttttggttcctaaagttgtattggtt
tctcaacaagctgaagccttgaaaaatcacactgatctcaaagttggaatgtattgggga
gacatgggagtagactattgggatgaagctacatggaaagtagaaatggagaaacatgag
gtgcttgtcatgacccctgcaatattgctctcttgcttgaggcatagctttatcaaactg
aatatgataaaggttttaataatggatgaatgtcatcatgctgggggtagacacccttat
gcttgtatcatgactgagttttaccatcaccagttaagatctggtgtctctgagcttcct
cgaatttttgggatgactgcatccccaattaagaaagctggaaattctgaagagaccttg
tcaaaaaatattcgtgaactcatgactctaatgcattcgaaggtttatacctgtcttagt
gaagctgtcatctcacagtttgtaccaagctcaaccctaaaattccgttattacaaggag
aaagcaatttcatataggctattctcagaattagccaataaactcaacatattaaaacaa
cagcatgagctttatgtgacaagctcagatttcacaaaatcagctgctgactccgcaatc
aggaaaatatctaagatttttgctagctcaatgttttgcttggatgagcttggtatttgg
ttggctttgaaggctgcagagagcttatctttgattgaagttgaaactttcttatggggt
aactctggggatcaaattgtaaaaaaatttagttcggctactatactatcactgaaaagt
tacataccatctgatcctcagtggactattggtgacaatatgaattccgatttggatagg
gggctattgacctccaaagtgttctgtcttattgaatgtcttcttgagtacagttacagg
gattttactgaaatgagatgcatagtttttgtggaaagggtcattacagctattgtcctt
gagactctattgaacactttgcttccaaaatacaatagctggagggctaaattcattgca
ggaaacagcagtcaattgcaaaaccaatccaggaaaatccaaaatgaaattgtggaagaa
tttcgtttgggattggtcaacatcattattgcaacatcaattcttgaagagggtttagat
gttcaaagttgcaatttggttattagatttgacccatctcccacagtgtgcagtttcatt
cagtctcgtggccgtgccaggatgcaaaattcagattacatattgatggttaagagcggg
gattcagttacgcgttctcgactagaaaaataccttgctggtgtggaaatcatgaggaag
gagtccttgcgtcagtcttcccttccatgtgaacgtcttgaaagtgaccgatttcatgag
gaagtttatcgtgttgcaagcacggaagctgttgtcaatcttagctctagtattactttg
gtgcacttatattgctcacgactccctgcagatgggtactttaaaccaactccaaggtgg
gacaaagagactggaacattgtatcttcctaagagctgtcctatacatgctattcgtgta
caaggtgacaccaagttcttaaaaaatattgcatgccttgaagcatgcaaacaacttcat
aagattggagctttgacagataatcttgtcccttctattgtcgttgaagaagcagaggtc
gatgaatttgggaatgaaccctatgatgaggagcaaccgagttatgtaccatttgaactg
gtaaatcgcgtgttaaacaatagtaacacaacctactattgttatttaatagagctaaaa
caaaattttagctatgattttaccgtgcaagacatttttcttgcaactagagtcgagctc
gacccagaaatcgcatgcatgcaatttgatatgtgttttgacagagggagcttggatgta
aacttgaaatacaaaggatccattaatctctcgccggatcaggttcttttgtgtaaaagg
ttccaggttaatgtccttggaattcttatggatcataaaacagataagggaactgttttt
gacgaatgctgtttggaagataatcttgaggttgattatcttctgctgccatctattgct
atagaggaaagaacagatgttgattggttaactattaattcgatacatccatctaaaatg
gagtgtctgcatcatgaagccaacatacggactgaaaagggtttcatttgtgcttgcata
ttgaaaaatgccttggtctgtactcctcataatggccgtacttacatcacgactaatata
atggaattggatggaaactcgcctctagaagtaagggatggtgaaattactacctacaag
aattactttgaacagaagcatggcattcaattgcgttttgaccatcaacgcctacttaag
gcaagacacatttttccagtaaaaaattattgtcatggatccagacaagtaaaggagaga
gatgtcaacaaaacctttgttgaattacctcctgaactatgtgctattatcatgtcacca
ataccagttagcacgctttattcattttcttttattccatcgatcatgcatagacttgag
tcgttgcttggagctttcaactttaaaaagttgcatttgaatcattgtccgcagaatcag
attcaaacattcaaggtcttggaagcaatgaccacaaagagttgcaaggaaacctttcat
tacgagtctctagagacacttggagattcttttctaaaatatgctactagtcaacagctt
tttaatacgtatccagatcaccacgagggtctccttactgtgaagaggcagaagatcatt
tgtaatgctgccctctgtaagttaggttgccgcggtaaacttccgggcttcatacggaac
gagccttttgatcctaagacctggaccattcctggatctagatcaaaaagttctaaatta
aaagagacggtttacaaggggacgaaaatatatactcgcggagatagaaatttgaagcgt
aaaattgttgctgatgttgttgaagcactaataggtgccttccttaccgctggcggtgag
aaggctgcattgttgtttatggattggattggtatcaaagtgaattttaatattatgccc
tatgagaggcaactcaatgctcccgagaatgtagttaatgtcggctttctagaatcccta
ttgaagtactcattcaggaacccttctctattagtagaagctatgacacatggttcttac
atgcttcccgaagtgccaacatgctatcaagtacttactttttgttattga
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integrated database retrieval system
