Cicer arietinum (chickpea): 101501687
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Entry
101501687 CDS
T02819
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101501687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101501687
Spliceosome [BR:
cam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101501687
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
101501687
NCBI-ProteinID:
XP_012570273
UniProt:
A0A1S3E4A5
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Position
4:complement(18027915..18034338)
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AA seq
838 aa
AA seq
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MDDREKSDRRNRDRHSERDRDHRHHRSRHDSDDHRHNRSDRNVKHDHKSREDREGSRDRD
RLYDRDEREGSKGRSRVKRDEEREDSVEPRHSSHSHKRKDREHSEDRELEDKRVRVSDER
NEVKKERRKFGDKVKREEDYDNDNNNNGGVKVNVNESKVKEEVTDGVHGFASSKDNASLQ
NGISLGSPAVAPASVHETSLAPPPSFPIKVSSISTTNENKGVSITRSHEVTGKSSTDGSS
TTAGKPGSLSIDALAKAKKALQMQKVLSEKLKRIPQLNKSSTSNAQESTHLGYKTESTVP
SLGSGVASRPVTSASSGPVANISIFPAAGAANPPASGTSAAGATTAPNYEAVRRAQELAA
RMGFRHDPQFAPLINMFPGQIATTDVTISQKPTKAPVLRLDAQGREIDEHGNVVNVTKPS
NLSTLKVNINKQKKDAFEILKPVLEVDPDSNPHFDERMGINKTKLLRPKRMNFLFVEEGK
WSKDAETIKLKSKFGEAQAKEQKAKQAQLAKAKAAPDINPNLIEITERVVIKEKLKDQIP
EIEWWDAALLHSGNYGDIANGTIVEDQLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLT
KQEQKKLRTQRRIAKEKERQEMIRQGVIEPPKPKVKISNLMKVLGSEATQDPTRLEKEVR
NAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPNSLDTLVSLYRINDLSHPKARFRV
DVNAQENRLTGCAVICDGISIVVVEGGIKSIKRYGKLMLRRINWSDVSKEKEENEDSDDE
KPANKCVLVWQGSVAKPSFNRFGVHDCITEAAARKVFVDAGVPHYWDLAVNYVEDEAV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagagagaaatcagataggagaaacagagatcgacactccgaacgcgaccgc
gaccacaggcaccaccggagccgccacgattccgatgaccaccgccataatcgatctgac
cgtaatgtcaagcacgaccacaaatccagggaagaccgagaaggaagcagagatagagat
aggttatatgatagagacgaaagagagggtagcaaaggtaggtctagagtgaagcgcgat
gaagagagggaagattcagtggaaccgcgacactcctcgcattctcacaagcggaaagat
agagaacacagcgaggatcgggagttggaggataagagagttagggtttccgatgagaga
aatgaggtgaagaaggaacgtaggaaatttggggataaagtgaagagagaagaagattat
gataatgataataataataatggaggagttaaagtcaatgtcaatgaatccaaggtcaag
gaggaagtcactgatggtgtccatggctttgcctcttccaaagacaatgcttcactgcaa
aacggcatttccttgggatcgcctgctgtggcgcctgctagtgtgcatgagacatctttg
gcccctcctccttcctttcccatcaaggtatcttcgatttctaccacaaatgaaaataag
ggcgttagtattaccaggtctcatgaggttactggaaaatctagtacagatgggtcttct
acaactgctggaaaacctggaagcctctctattgatgccttagctaaggctaagaaggct
ttgcaaatgcagaaagtgttgtcagagaagctgaagagaattcctcagttgaataagagt
tctacctcaaatgcccaagaaagcacacatttgggttacaagactgaatctacagtgccc
tctttgggttctggagtggcatcaagacctgtcacatcagcttcttcagggcctgttgca
aatatttcaatttttcctgccgctggtgctgcaaatcctccggctagtggtactagtgct
gctggtgccacaactgcacccaactatgaagccgtcagacgtgctcaggagcttgctgcc
agaatgggatttcgtcatgatcctcaatttgctcctctaataaatatgtttcctggccag
attgcaacaacagatgttactatctctcagaaaccaaccaaggctcctgttcttcgtctt
gacgcccagggacgggaaatagatgaacatggaaatgttgttaatgtaactaagccaagc
aaccttagcacattaaaggtcaacattaacaaacagaagaaagatgcattcgaaatacta
aagcctgttctggaagttgatcccgactctaaccctcattttgatgagaggatgggtatc
aacaaaacgaagctgctgcggcccaagaggatgaatttcctgtttgtggaggaaggaaaa
tggtcaaaagatgctgaaacaataaaattgaagagtaaatttggagaagctcaagcaaaa
gagcagaaggccaaacaagcacagttagcaaaggcaaaggctgctcctgatataaatcca
aacttaatagaaataacagagagagttgtaatcaaagaaaaactcaaggaccaaattcca
gaaatcgagtggtgggatgctgctcttctgcattctggaaattatggtgacattgctaat
ggaactatagttgaagaccaactgaaaatggaaaaaatcaccatttatgtggagcatcct
cgacccattgaaccacctgctgagcctgcccctccaccacctcaacccctcaagctaacc
aaacaagagcagaaaaaactccggacccaaaggcgcattgctaaggagaaagagcgacag
gagatgattagacagggtgtcatagaaccgccaaaaccaaaggtcaagattagcaattta
atgaaagtacttgggtctgaagcaactcaagatcccactaggcttgaaaaggaagtacgt
aatgcagctgccgagcgtgagcaggctcacatagataggaatattgcacgcaagcttact
cctgctgagctgcgtgagaagaaggagaggaagctgtttgatgatcctaattcactggat
acacttgtctcactttacaggataaacgacctctctcatccaaaggcccgctttagagtc
gatgttaatgctcaagagaaccggttaactggatgtgctgtgatttgtgatggtattagc
attgttgtggttgaaggtggaattaagtcaattaagaggtatgggaaacttatgcttaga
cgcataaattggagtgatgtttcaaaagagaaagaagaaaatgaagattcagatgacgag
aagcctgccaataaatgtgttctggtgtggcaaggaagtgttgccaaaccgagcttcaat
aggttcggtgttcatgattgcatcactgaagcagctgctcgaaaagtttttgtggatgct
ggggttcctcattattgggacctagctgtcaactacgtagaagacgaagctgtataa
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