Cicer arietinum (chickpea): 101501805
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Entry
101501805 CDS
T02819
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101501805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101501805
03012 Translation factors [BR:
cam03012
]
101501805
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101501805
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101501805
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101501805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
T2SSE
Rad17
ATPase
NACHT
Motif
Other DBs
NCBI-GeneID:
101501805
NCBI-ProteinID:
XP_012570391
UniProt:
A0A1S3E5S9
LinkDB
All DBs
Position
4:complement(26978913..26990818)
Genome browser
AA seq
1034 aa
AA seq
DB search
MPYWLLRNTFHSHHHFASIHPHASKLFPSNLRITTSVMSYRPNYQGGGRRGSSSSSGRGG
GRRGGGGGGGGGRGGGRGEQRWWDPVWRAERLKQQQAQKEVLDENEWWDKIEKMKKGGEQ
EMVIKRYFSIADQQILADMAYQHELYFHAYNKGKTLVVSKVPLPDYRADLDERHGSTQKE
IRMSTDIERRVGNLLNSSQSTGTASASAPSVSTDMGHRQSTTTIKSASSQQGDYSKEKLS
AALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVRENQVLVVSGETGCGKTTQLP
QFILEEEISCLRGADCNIICTQPRRVSAISVAARISSERGETLGKTVGYHIRLEAKRSAE
TRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLIL
MSATINADLFSKYFGNAPTMHIPGFTFPVVEHFLEDVLEKTRYSIKSEFDNFEGNSRRKR
KQQDSKKDPLTEMFEELDVDTHYKNYSLAVRKSLEAWSGSQIDLGLVEATIEHICRNEGG
GAILVFLTGWDEISKLLDKLEGNNLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKI
VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQ
PGVCYRLYPKLIHDAMPEYQLPEILRTPLQELCLHIKSLQLGTVASFLGKALQPPDPLAV
QNAIELLKTIGALDDKEELTPLGRHLCTVPLDPNIGKMLLMGSIFQCLSPALTIAAALAY
RNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKSRGGEKEFCWENFLSPV
TLRLIDDMRMQFLNLLSDIGFVDKSKGVNAYNQYSHDLEMVCAILCAGLYPNVVQCKRRG
KRTAFYTKEVGKVDIHPSSVNAGVHLFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFG
GNLDPSKNGEGIEMLGGYLHFSASKSVIELITKLRGELDKLLNRKIEEPGFDISGEGKGV
VAAAIELLQNQIMR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgccttactggcttctccgcaatacttttcactcccatcatcacttcgcttccatacac
ccgcacgcatccaagctttttccctccaaccttagaatcaccacctctgtaatgtcctac
cgccctaactaccaaggcggcggccgcagaggtagttcctcatcctccggtcgcggcggt
ggccgtcgtggaggaggaggaggcggcggcggcggcagaggtggtggacgcggtgagcaa
agatggtgggaccctgtttggcgagctgaacgccttaaacaacaacaagcacagaaggaa
gtgcttgatgagaatgaatggtgggataagatagagaagatgaaaaaaggaggggaacag
gagatggttataaagcgttacttcagcattgcagatcagcaaatcctagctgatatggct
tatcaacacgagctttacttccatgcatataataaggggaagactcttgttgttagcaaa
gttcctttgcctgattaccgtgcagatcttgatgagcgtcatggatcaacacaaaaggag
attagaatgtccacagacatagagaggagagtaggaaatcttttaaatagctcacagtca
acggggacagcatctgctagtgcgccttctgtatcaactgatatgggacatagacaatcc
actactactataaaatctgcttcttcacagcagggtgattattcaaaggagaaactcagt
gctgcactcaaggaaaggcaggagctggtgcaggcaagtgatagtttgaaggaaatgaaa
tcatttagggagaagcttcctgcatttaaaatgaagtctgagtttctgaaagctgttcga
gaaaatcaggtattagtagtttcaggagagacaggctgtggcaaaacaacacagctgcca
caattcattctggaagaagaaatatcatgtcttcgtggagctgactgcaacataatttgt
actcagcctcgtcgtgtgtctgcaatttctgttgccgctcgtatatcttctgaaaggggt
gaaactcttggcaaaactgttggataccacatccgtcttgaagctaaacgttctgcagaa
acacgccttcttttctgcaccactggtgtattacttcggcagctggtccaagatccagag
ttaactggtgttagtcatttgctagtggatgaaattcatgaaagaggcatgaatgaagac
tttttaattataattttacgtgaccttcttcctcggcgtccagatttgcgcctcattcta
atgagtgccacaatcaatgctgatttattctccaaatactttggaaatgccccaacaatg
cacataccgggatttactttcccagtggtggagcatttcctagaagatgtgttggagaaa
actagatatagcatcaagtcggagtttgacaattttgaggggaactcaaggagaaaaagg
aaacaacaagattctaagaaggatcctttgaccgaaatgtttgaggaacttgatgtagat
actcattacaaaaattacagcttggccgttagaaaatctcttgaagcttggtcaggttca
caaattgatttgggtctggtagaagcaacaattgagcatatatgtcggaatgaaggtggt
ggagcaattcttgtatttcttactggctgggatgaaatttctaagttacttgacaaactt
gaaggaaataacttacttggaaaccgtagcaagttcttaatccttccaatacatggttca
atgcctaccatcgatcaatgtgaaatatttgaccgtcctccccctaacaaaagaaaaatt
gtgctagcgacaaatattgctgagagtagcatcaccatagatgatgttgtgtatgtcata
gactgtggtaaagcaaaggaaaccagctatgatgctctaaataagcttgcctgcttgttg
ccatcatggatttcaaaggcttcggcacgtcagaggcgtggtcgtgctggtcgagtacaa
cctggagtttgttatagattgtatccaaaactgatccacgatgctatgccagagtatcag
ttacctgaaatcctacgaacacctttgcaagagttgtgcctgcacattaaaagcttgcag
ctgggaactgtggcatcatttttaggaaaggcacttcagccaccagatcctcttgctgtt
caaaatgctattgaacttctaaagacaattggggcattagatgacaaggaggagcttact
ccattgggtcggcatctttgtactgtacctctggacccaaatatagggaagatgcttctc
atgggctctatctttcagtgcctcagtcctgcattaactattgctgctgcacttgcttac
cgcaacccatttgtcctacctataaacagaaaagaggaagctgatgcagcaaaaagatct
tttgctggtgactcttgcagtgatcatatagcccttcttaaagcttttgaaggatggaag
gaggcaaaaagtagggggggtgaaaaggaattttgttgggaaaatttcctatccccagtg
acgttgcggttgattgatgatatgagaatgcaatttctcaatttattatctgacattgga
tttgttgacaagtcgaagggtgtcaatgcttacaaccagtacagtcatgatttggagatg
gtttgtgcaattctttgtgccgggctctaccctaatgttgtgcagtgcaaaagaagagga
aaacggacagcattctacactaaagaagttgggaaggttgacatccatccctcttctgtt
aatgctggagttcatctctttcctctgccctacttggtatatagtgaaaaagtgaaaaca
accagcatctatattagagactctaccaacatttcagattatgccctacttctatttggt
ggtaatctcgaccctagcaaaaatggtgagggcattgagatgcttggaggttaccttcat
ttctctgcttcaaagagtgtcattgagttgataacgaaattacgtggggagcttgacaag
cttctaaacagaaaaattgaagaaccagggtttgacatttctggtgaaggaaaaggagtg
gttgctgctgctattgagttgctgcaaaatcaaatcatgcgataa
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