Cicer arietinum (chickpea): 101502126
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Entry
101502126 CDS
T02819
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101502126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cam03400
]
101502126
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101502126
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
DUF6716
Motif
Other DBs
NCBI-GeneID:
101502126
NCBI-ProteinID:
XP_004496581
UniProt:
A0A1S2Y0J9
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Position
Ca4:12574034..12584156
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AA seq
1076 aa
AA seq
DB search
MGKQKQQVISRFFAPKPKTPSSTTASPPSSSTPKISSTVTFSPSKRRLISHLTSPNKQPK
LSPHTNNPVPSPPNPSLHNRFLHKLLEPTHPQLPSSSKPVKFTPLEHQVVELKAKYPDVL
LMIEVGYKYRFFGQDAENAARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVV
KQTETAAIKAHGLNRSGPFCRGLSALYTKATLEAAQDLGGEEDECGTRSNYLLCVVEKSI
LGEKSSCGVEGGFDVRIGIVGVEISTGDVVYGEFNDNFLRSELEAVVVSLSPAELLLGKP
LSKQTEKLLLAFAGPSSNARVEHASRDCFTDGGAFAEVMTLYENMCVDSPSDSMHSNELV
EHRSQQTVAKEVMDLPDLAVEALALTIRHLKGFGFERILCSGALRPFVSNTEMTLSANAL
QQLEVLQNNSDGSESGSLLQIMNRTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAE
SLGSCNSMKNLGCFEEDSDVAIVQPGLAYILSSVLTALGRASDIQRGITRIFHCTATPSE
FVAIIQAILSAGKRLQQLNIGEGDDNNKLRSDLLKKLISTASSASVIGNAAKMLSSLNKD
SADQGDLTNMIIATEGQFPEVITAQKDFQMAVEQLDSLIDLYRKRLGMQNLEYMCVSGVT
HLIELSTDVKVPPNWVKVNSTKKTIRYHPPEVVTALDGLSLAKDKLTVACRAAWDSFLRD
FSKHYAEFQASVQALAALDCLHSLAILSRNKGYVRPVFVDDYEPIQIQICSGRHPVLETT
LQNNFVPNDTSMHGDREYCQIVTGPNMGGKSCYVRQVALIALMAQVGSFVPASSAKLHVL
DGIYTRMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYA
TLHYLLKQKKSLVLFVTHYPKIACLETEFPGSVAAYHVSHLTSHDDASKNSNNHEDVTYL
YKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHGRSGKELLLDAPVI
DEDQEPHDCPRQEFGRAYKEFYSNLKAAILDDDHAKSFQLLENARSIAKSLISRSM
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcaaaagcaacaagtcatttctcgtttcttcgccccaaaacccaaaacacct
tcatcaaccaccgcttcacctccttcttcttccactcctaaaatctcttccaccgtcact
ttctctccatccaaacgccgcctaatctctcacttaacatctcctaacaaacaacccaaa
ctctccccacacaccaacaaccctgtaccctctccacccaatccttccctccacaaccgc
ttcctccataagcttctcgaacccacacacccacagcttccttcctcttccaaaccggta
aagttcactcctttagaacaccaagtagtggaactcaaagccaaatatcctgatgttctt
ttaatgatcgaagttggttacaagtatcgttttttcggccaagatgctgagaatgctgct
agagttttgggtatatatgcacacatggatcataactttttaactgctagcataccaact
tttcgattaaatgtccatgtgaggagacttgtgagtgcagggtacaaagttggtgttgtt
aagcagactgagactgctgccattaaggcccatggtttgaaccggtccggcccattttgt
cgaggtttgtccgcgttgtacaccaaggccacactcgaggcggctcaggatttgggagga
gaggaagatgagtgtgggactaggagtaactacttgctttgtgttgtggagaagagcatt
ttgggagagaaaagtagttgtggggtggaaggtggttttgatgtgaggattggaattgtt
ggtgtggagatatcaaccggtgatgttgtttatggagagtttaatgataattttttgagg
agtgaacttgaggctgttgttgtgagtttgtctcctgccgagttgcttcttggaaaacct
ctttccaaacaaacagagaagttattattggcttttgctggaccctcatcaaatgctcgt
gtggagcatgcctcacgagattgctttactgatggaggtgcttttgctgaagttatgacc
ttgtatgagaacatgtgtgttgacagtccatcagattcaatgcacagcaatgaattggtt
gaacatagaagtcagcaaacagtagccaaggaggtgatggacctgccagatctggctgtc
gaagctttggccttaaccattcgccatttaaaaggattcggttttgaaagaattctgtgc
tcaggtgctttaaggcccttcgtaagcaatacggaaatgactctgtcagccaatgcactt
caacaactggaggttttacaaaataacagtgatgggtctgagagtggttccttgctgcaa
attatgaatcgcactcttacaatatttggttctaggcttcttaggcattgggtatcacac
ccattgtgtgatcaaaccttgatttctgctcgtcttaatgctgtatctgaaatcgcagag
tccttgggatcttgtaatagcatgaagaatcttggatgttttgaagaagattctgacgta
gcaattgtgcagcctgggttagcgtacatactttcttcggttttgacagccctgggccga
gcatctgatatacaacgcgggattacaagaattttccattgcactgctaccccatctgag
tttgttgccattattcaagctattttgtctgctggaaaacgacttcagcaacttaacata
ggagagggggatgataataataaattgcgctctgatttgctaaagaagttaatttcaact
gcttcctctgcaagtgttattggtaatgctgcaaaaatgttgtcatctttaaataaagac
tctgctgatcaaggagatctaacaaatatgataattgcaactgagggacaatttccagag
gtaattacagctcaaaaggattttcagatggcagtggaacaattagattcattgattgac
ttgtaccgcaaacggcttggaatgcaaaatttggaatatatgtgtgtttctggtgtaact
cacttgatagagttatcaactgatgtaaaagtgcctccaaattgggttaaggtaaatagc
acaaagaaaacaattcggtatcaccctcctgaagtagtgacggcattggatgggttatca
ttagcgaaagataagcttactgttgcctgccgagctgcatgggatagctttctgagggat
ttcagtaaacactatgctgagttccaagcttctgttcaagcactagctgctttagattgt
ctccattcacttgccattctttcaagaaataagggttatgtccgccctgtttttgtagac
gattatgagcctattcagatacaaatttgttctggtagacatccggttttggagactact
ttacaaaataattttgtcccaaatgatacaagcatgcatggcgatagagagtactgccag
attgtcactggacccaatatgggggggaaaagttgctatgttcgccaagtggctctaatc
gctctcatggctcaggttggttcctttgtaccagcctcatcagcaaaactgcatgtcctg
gacgggatttacacccggatgggtgcttctgacagcattcagcaggggagaagcaccttc
ctagaagaattgagtgagacttcacatatacttcatcgatgtacggggcgttcactggtt
atccttgatgaacttgggagaggtacaagtacacatgatggcatggccattgcttatgcg
acattacattatcttctgaagcagaagaaaagtttggtcctatttgtcactcattatcca
aagattgcatgtctggaaactgaatttcccggctctgtagcagcatatcatgtgtcacat
ctgacctcacacgatgatgcgagtaaaaactccaacaatcatgaagacgtcacttatcta
tacaagcttgtacctggggtgtcggaaaggagttttggttttaaggttgctcaacttgca
cagttaccgtcacattgcattagccgagctattgtcatggcttctaaactagaagcacta
gtaaacaatagaatacatggtagatcaggaaaggagttgttgttggatgcacctgttatt
gatgaagatcaagaaccacatgactgtccacgtcaagaatttggtagagcatataaggaa
ttctattcaaacttaaaagctgcaatattagatgatgaccatgcaaaaagctttcaactt
ttagagaatgctagaagcattgcaaaatcattaattagcaggtcaatgtag
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