KEGG   Cicer arietinum (chickpea): 101502460
Entry
101502460         CDS       T02819                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03013  Nucleocytoplasmic transport
cam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101502460
  09122 Translation
   03013 Nucleocytoplasmic transport
    101502460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101502460
   03041 Spliceosome [BR:cam03041]
    101502460
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101502460
Spliceosome [BR:cam03041]
 Complex C
  Other components
   EJC/TREX
    101502460
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101502460
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Vps41 DSE1_N WD40_RFWD3 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_EIPR1 Tricorn_2nd WDR90_beta-prop_4th Beta-prop_DCAF12 TRM82_WD Beta-prop_IFT80_2nd Beta-prop_IFT122_2nd Beta-prop_NUP159_NUP214 PAC11 Beta-prop_WDR41 Beta-prop_Nup120_160 WD_LRWD1 DUF7099 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 101502460
NCBI-ProteinID: XP_004500191
UniProt: A0A1S2Y6G8
LinkDB
Position
5
AA seq 313 aa
MEEQISFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSL
RPLDTLMAHTAGCYCIAIDPTGRHFAVGSADSLVSLWVISEMLCVRTFTKLEWPVRTISF
NHTGDLIASASEDLFIDISNVHTGKTVHQIPCRAAMNSVEWNPKYNVLAYAGDDKNKYQA
DEGVFRIFGFENA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggaacaaatctcattcaagaatcttcatagcagagagtactccggtcacaagaaa
aaggtgcactcagtggcttggaattgcattggtacaaaacttgcttctggctctgttgat
caaacggctcgaatttggcatattgagccacatggccatggtaaggtcaaagatattgaa
ttgaagggtcacactgatagtgtggatcagctatgctgggatcctaaacatgctgatctt
attgcaactgcatcgggtgacaagactgttcgtctgtgggatgctcgtagtggaaaatgc
tcacaacaggcagaacttagtggggagaatatcaacattacgtacaaaccggatggtact
catgtagctgtaggtaatagggatgatgaattaacaatattggatgttcggaaattcaaa
ccaattcataggcgcaagttcaactatgaggtaaatgagattgcttggaacatgactggc
gagatgtttttcttaacaacaggaaatgggactgttgaagtattgtcttatccatctcta
cgacctcttgataccctcatggctcatacagctggttgttattgcattgcaattgaccct
acaggaagacattttgctgttggaagtgctgattcccttgtcagcttgtgggttatctcg
gagatgctttgtgtgcgtacctttacaaagctcgaatggcccgttcggaccattagtttc
aatcatactggggacttgattgcttcagcaagtgaggacttgttcattgatatttcaaat
gttcatactggaaagacagtgcatcagattccttgtagggctgccatgaatagtgttgag
tggaatcctaaatacaatgtacttgcatatgctggtgatgacaaaaacaagtatcaggct
gatgaaggtgtttttcgaatttttggttttgaaaatgcttaa

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