Cicer arietinum (chickpea): 101503277
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Entry
101503277 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101503277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101503277
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101503277
Spliceosome [BR:
cam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101503277
Complex B
101503277
Complex C
U2 SnRNP specific factors
101503277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101503277
NCBI-ProteinID:
XP_004494431
UniProt:
A0A1S2XTT6
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All DBs
Position
3:73614785..73619373
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AA seq
776 aa
AA seq
DB search
MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSSRKGHDNYEDTDIDNIEYDDDTRDE
ANNNNDGDGGGADKEEEIDPLDAFMEGIHEEMKAAPPPKPKEKAEDRYRDDEEDDPMESF
LRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGLIEYDSDDNPIVLDKKKIEPITPL
DHTSIDYEPFNKDFYEETPSISGMSEQDVIDYRKSLAIRVSGFDVPKPVKTFEECGFAPQ
IMAAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK
EEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVAT
PGRLIDMLKMKALTMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPR
KVEKLAREILSDPVRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLPETIDQGDTLV
FASKKATVDEIESQLAQRSFKVAALHGDKDQASRMDILQKFKSGTYHVLIATDVAARGLD
IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLVAAGQ
NVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGGAGGKGVRGVDFGLGIGYTAEPNN
APSNTVPSRSAAVNSLRTGMMSQFRSNFVAASSNSQNEGFSNNTSITVNKRPALAGFVSG
GSIGGDINTHQHTASYNPATSAANSTSQSSGVNPGQNSTNSSSKPRERRRPSGWDR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaagttcggattcgaaggtttcggcataaaccgccaatcaacgtacagt
ttcgagcgatctcaacctcctcaacgactctatgtccctccttcttcccgcaaaggccac
gacaactacgaagacaccgacatcgacaacatcgagtacgatgacgataccagagatgaa
gctaacaacaataacgacggtgatggtggtggtgctgataaggaagaggaaatcgatcct
ttagatgctttcatggaagggatacacgaggagatgaaggcggcaccacctccgaagccg
aaggagaaagcagaggataggtacagagatgatgaagaggacgatccaatggagagtttt
ttgagagcgaaaaaggatttagggttgacgcttgcatcggaagcgctgcatgctggatac
gattctgatgaggaggtttatgctgctgctaaggctgtggatgctggtttgatagagtat
gattccgatgataaccctattgttcttgataagaagaaaattgaacccataactcctctt
gatcacacttccattgattatgagcctttcaataaggatttttatgaggagacgccttca
atatcaggtatgagcgagcaagatgtaattgattacaggaagagtttggcaatccgagta
tctggttttgatgttcctaagccagttaaaacatttgaagaatgtgggtttgctccacaa
attatggctgctataaagaaacaaggttatgagaaacccacttctatacaatgccaagct
ttaccggttgtgctttctggaagagatatcattggcatagccaaaactggttctggtaaa
actgctgcttttgtgcttcctatgattgtgcatatcatggatcagccagagcttcagaag
gaggaaggtcctattggagtgatatgtgcgcctactagagaattggcacatcagatatat
ctcgaggctaagaaatttgcaaaagcatacggtatacgtgtctctgctgtctatggtgga
atgtcaaaacttgaacaattcaaagaacttaaggcaggctgtgagattgtcgttgctacc
cctgggagattaatagacatgctaaaaatgaaggcattgacaatgttgagagcaacttac
ctagtgcttgatgaggctgatcgaatgtttgatcttggatttgagccacaagtaaggtcc
attgttggtcagattaggccggaccgccaaactttgctattttctgcaacaatgcctcgc
aaagtcgaaaagttagccagggaaatcctttcagatcctgtcagggtgacagtgggggag
gtggggatggcaaatgaagatattactcaagttgttcaagtaattccttctgattctgag
aaactgccgtggcttctggagaaactgcccgaaacgattgatcaaggcgatacgttagtt
tttgcttccaaaaaggccactgtggatgaaattgaatcacagttggctcagagaagcttt
aaagttgctgccctgcacggtgataaggatcaagcttctcgtatggatattttacagaag
tttaaatctggcacctaccatgtgctaattgcaactgacgttgctgctcgtggtcttgac
atcaagtcaattaaaaccgtggtaaactttgatattgctaaagatatggacatgcatgtc
catcgcattggaagaacaggccgtgctggtgacaaggaaggagttgcatacactcttata
actcaaaaagaagcacggtttgctggcgaattggtaaatagcttagttgctgctggtcag
aatgtgtccacggagttgatggatcttgctatgaaggatgggagattcaggtcgaaacgc
gatgcaagaaaaggaggtggaagaaaaggcaaaggcagaggtggtggtggtgcaggtggc
aaaggcgtgcgaggagtggatttcggcttgggcattggatatactgcagagccaaacaat
gcaccatctaacacagttccaagtcgatctgctgctgtaaattctctgcgaacaggaatg
atgtcacaatttaggagtaactttgttgctgcatcatcaaactctcaaaatgaaggattc
agtaataatacaagcataactgttaataagagaccagcactcgctggctttgtatctggt
gggtcaattggcggcgatataaatactcatcagcatactgcttcatacaatcctgctaca
tcagctgcaaattccactagtcaaagttccggagtaaatcctggtcagaacagcacaaac
agcagttctaaacctagagaaaggagaaggccatcaggttgggatagatag
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