Cicer arietinum (chickpea): 101503939
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Entry
101503939 CDS
T02819
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101503939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101503939
03012 Translation factors [BR:
cam03012
]
101503939
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101503939
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101503939
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101503939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
AAA_11
AAA_23
Dicer_dimer
T2SSE
PhoH
Myosin_head
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101503939
NCBI-ProteinID:
XP_004497017
UniProt:
A0A1S2Y1H0
LinkDB
All DBs
Position
4:15306527..15320175
Genome browser
AA seq
1177 aa
AA seq
DB search
MLPNSSIPKTLKPSFHLPFLAMKDRPSLSSHGAIYVPPHHRLRSVITSANSPAPVVAKLR
ENHTPPPTTLQTPLSDNKINSRYVSAYDDVIFEEGSNRQVEVPSLPSGFPSETMEEWYRK
LTMLLNDKSKQELFSREKKDRRDFDEIAVLATRMGLYSHMYSKVVVFSKVPLPNYRYDLD
ERRPQREVSMPITVFRRVGAYFEEYLSQMSRVNKSFSDLSFARSSSDGSFGTDEGLFEQP
EQLASSKTVVEKIVRRISLQMRDQQQAWQESPEGRRMLEFRSNLPAYKEKEAILSAISKN
QVIIISGETGCGKTTQIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEK
LGESVGYRVRLEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFL
LIILKDLLPHRPKLKLILMSATLDAELFSLYFNGAPIVNIPGLTHPVRTLFLENILEMTG
YRLTPCNQVDDYGQERSWKMNKQAPRKRKSQIASAVEDAIRSADFKDYSLQTQESLSCWN
PDCFGFNLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLQAHAVLGDSKRVLLLACH
GSMASSEQKLIFEEPEYGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPC
LLPTWISKASARQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKS
LRLGSISDFLSRALQSPEILAVQNAVEYLKIIGALDENENLTILGRYLTMLPMEPKLGKM
LILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFSGAYSDHLALVRAYEGW
KDAEVDLGGYDYCWKNFLSFQSMKAIDALRREFIGLLTDIGLVDSNTTSYNTWSYDVNLI
RGIICYGLYPGICSVVHNEKSFALKTMEDGQVLLYLNSVNARETQIPYPWLVFNEKIKVN
SVFLRDSTAVSDSMVLLFGGNLSKGDADNHLKMLGGYLEFFMEPTVVDMYQSIRRELDDF
IQSKLLSPRMSIHSYHNLLSAVRLLISNDTCEGRFVFGRQVLKSSKTSVVASHPASLVSR
TDSGPGGDNSKSQLQTLLTRAGYAPPVYKTKQLKNNQFRATVEFNGMQIMGQPCNNKKSA
EKDAAAEALQWLMGKQSGCEYVNHMSMLLKKSKKDHN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgctccctaattcgtccattcccaaaaccctaaaaccctcatttcatcttccatttctc
gccatgaaggaccgcccctcgctgtcctcccatggcgccatttacgttcctcctcaccac
cgcttacgctccgtcatcacctccgctaactcccccgctccggttgtcgccaaactacgc
gaaaaccatacacccccacctaccactcttcaaacccccttatctgacaacaagataaat
tctcgctacgtttctgcttacgatgacgtcattttcgaggaaggttccaatcgtcaagtt
gaagttccttcactaccgagtggtttccccagcgaaaccatggaagagtggtatcggaaa
ttaacgatgctgttaaatgacaagagtaagcaagagttgttctcgagggagaaaaaggat
aggcgtgattttgatgaaatagcagttttggcaactagaatggggctgtatagccatatg
tattccaaggttgttgtcttcagtaaggtgccacttcccaactatagatatgatttggat
gaaaggcggccccagagggaagtgagcatgcctatcactgtgttcaggagggttggggca
tacttcgaggaataccttagccaaatgtccagggtaaacaaaagcttttcagatttgtct
tttgcaagatcaagcagtgatggcagttttggtacagacgaagggctttttgagcaacct
gagcagctagcatccagtaagactgttgtcgagaaaattgtccggcggataagcttgcaa
atgcgagatcagcagcaagcttggcaggaatcacctgaaggaagaagaatgttagaattt
cgtagcaatctccctgcttataaagagaaagaagcaatattatcagccatatcaaagaat
caggtaatcatcatttcaggtgaaacaggttgtggcaagacaacccaaattccacaattt
attttggagtctgagatagaatcagttcatggagctgcgtgtaatattatatgcacacaa
ccaagacgcatttcagctatgtctgtttctgaaagggttgcttttgagagaggggagaaa
ttgggtgaatctgttggatatagagttcgactggagggaatgaaagggagagatacacat
ctactcttttgcacgacaggcatcttattaagaagattacttgctgatagaaaccttaaa
ggtgtaactcatgttattgtggatgaaatacatgaacgtgggatgaatgaagattttcta
cttattatccttaaagatctccttcctcatcggcccaaactcaaacttattttgatgagt
gctaccctagatgcagagctgttctctttgtacttcaacggggctccaatagtgaacata
ccgggccttacacaccctgttagaactcttttcttggagaacattcttgaaatgacgggc
tatcgattgactccttgtaatcaagttgatgattatggtcaagaaaggtcgtggaaaatg
aacaaacaggccccaagaaagagaaaaagccaaattgcttctgcagtagaggatgcaatt
agatctgctgatttcaaagattacagtcttcaaacacaggagtctttgtcatgttggaat
cctgactgttttggttttaatctcatagaatatatcctatgcaatatatgtgagaatgaa
aggcctggtgctgttttggttttcatgactgggtgggatgatataagctctctgaaagag
aagctacaggcacatgctgtcttgggagattctaagcgtgttttgctgctagcgtgtcat
ggctcaatggctagttcagagcaaaagttaatatttgaggagcctgaatatggagtgaga
aaaatagtgctagcaacaaatattgctgaaacgagtatcaccataaatgatgttgttttt
gttctggactgtggaaaagcaaaagaaacgtcatatgatgcactgaataatacaccttgt
ttgcttcctacatggatctctaaggcttctgctcgacaaagaagaggaagagctggtcgt
gttcaacctggagagtgttaccatctctatcctagatgtgtatatgatgcttttgccgag
tatcaattgccagaaattttgagaacacctttgcagtctctctgtttacaaatcaaaagt
ctaagacttggaagtatatctgacttcttgtctagggctttgcagtctcctgaaattctc
gcggtacaaaacgcagttgaatatttaaaaataattggggctttggatgagaatgagaat
ttgactattctaggacgctatttgacaatgcttcctatggaacccaaacttggcaagatg
cttatattaggtgctatcttcaattgcctggatcccatattaactgttgttgctggcctt
agcgtgagagatccttttctaacaccactggataaaaaagatcttgcagaggcagcaaaa
tctcaattctctggtgcatacagtgaccacctagcgcttgtacgtgcttatgagggctgg
aaagatgctgaggtagacctgggtggatatgactattgctggaaaaactttctttcattt
caatccatgaaagctatcgatgctcttcggagggagttcataggcctgcttacggatatt
ggattagttgatagcaacacaaccagctataatacatggagctatgacgtaaatctcatc
cggggaattatttgctatggtctatatcctggaatttgttctgtggtgcataatgagaag
tcattcgctttgaagacaatggaggatggtcaagtgctcttatatttgaactcggttaat
gctcgggaaactcaaattccatatccatggttagtttttaatgagaagataaaagtgaac
tcagtttttctacgtgactcaacagctgtttctgattcaatggtgcttctgtttggtgga
aacttatcaaaaggagatgctgataatcacttaaaaatgttgggaggatatctggagttt
ttcatggagcctactgttgttgacatgtatcagagtataaggagagaacttgatgacttc
attcagagcaaactactttctccaagaatgagcatacactcatatcataacctcttatct
gcggtacggttgctgatttccaatgacacatgtgaaggaagatttgtatttggtcgccag
gtccttaaatcatcaaagacatctgtggtggcctcacacccagcatcattggtttcaagg
acggacagtggacctgggggtgataattctaaaagtcagctccaaactttgcttacaaga
gcaggatatgctccccccgtctacaagactaaacagttgaagaacaaccagtttcgggct
acagttgagttcaatggaatgcagattatgggccaaccttgtaacaataagaagagtgca
gagaaagatgctgctgctgaagcattgcaatggttgatgggcaagcagtcaggctgtgag
tatgtcaatcacatgtcgatgcttctgaaaaaaagtaagaaggatcacaattaa
DBGET
integrated database retrieval system
