Cicer arietinum (chickpea): 101504170
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Entry
101504170 CDS
T02819
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03020
RNA polymerase
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101504170
09124 Replication and repair
03420 Nucleotide excision repair
101504170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101504170
03400 DNA repair and recombination proteins [BR:
cam03400
]
101504170
Enzymes [BR:
cam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101504170
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101504170
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101504170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MtxA_C
Motif
Other DBs
NCBI-GeneID:
101504170
NCBI-ProteinID:
XP_004499217
UniProt:
A0A1S2Y4F4
LinkDB
All DBs
Position
Ca4:48255477..48264401
Genome browser
AA seq
1194 aa
AA seq
DB search
MDLDEEQEYDQQMMDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSIKDQKKKGA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatttagatgaagaacaagagtacgatcaacaaatgatggatgaagaagacgacgaa
gaagaaatcactcaagaagatgcttgggctgttatttcagcttacttcgaagaaaaaggt
ttggttcgtcaacaacttgattcattcgatgagttcattcaaaacactatgcaggaaatt
gttgatgaatctgcggatattgaaattcgacctgaatcacagcataatccaggtcaccaa
tccgatttcgcagagacgatttataagataagttttggtcagatttacttgagtaaaccg
atgatgacggaatcagatggagaaacctctaccttgtttcctaaggcagctaggttaagg
aatcttacttattcagctcctttgtatgttgatgtttctaagagggttattaagaaagga
catgatggtgaagaagtcaccgagactcaggattttaccaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttatttcagaattcggagaaggatttgact
gagcttggtgagtgtccgtatgatcaaggcggatatttcattattaatggcagtgagaag
gttctcattgctcaggagaagatgagtaccaatcatgtctatgttttcaagaagaggcag
cctaataagtatgcttatgtggctgaagttcggtccatggcagagtcccaaaacagacct
cctagcactatgtttgtgcgcatgctctctcgaactagttccaaggggggttcttcagga
cagtatatacgtgctactcttccatacattcgaactgaaattcctatcattattgtgttt
cgggcattgggatttgttgctgacaaggatattctagaacatatatgctatgatttctcg
gatactcaaatgatggagttgcttcgtccttccctggaagaagcatttgtaatacaaaat
caacaggttgcacttgattacattgggaaaagaggagcaactgtaggtgtaaccaaggaa
aagagaattaagtatgctaaggatatccttcaaagggagatgcttccacatgttggtgtt
ggagagtattgcgagaccaaaaaagcatactattttggatatatcattcatcggctactt
ctatgtgcacttgggcggagggccgaagatgatagggatcattacggaaacaagaggctg
gacctggccggtcctttacttggtggtctctttagaatgctattcagaaagcttactaga
gatgtcaggggttatgtacagaagtgtgttgataatgggaaggatgttaacctgcaattt
gctatcaaagctaaaaccatcacaagtggacttaaatactcacttgctactggtaactgg
gggcaagcaaatgccgcgggtactagagctggagtgtcacaagtgctaaatcgtttaact
tatgcgtccactttatctcacttgcgaagattgaattctcccataggacgtgaagggaag
ttggccaaaccaagacagttgcataattcacaatggggaatgatgtgtcccgcagaaaca
cctgaaggacaagcctgtggactggtgaagaatctggccttgatggtttacataacagtt
ggctcagcagcttatcctattctggagtttttagaagaatggggtacagaaaattttgag
gaaatttctccggcggtgattccccaagctacaaaaattttcgtaaatggttgctggatg
ggtattcatcgtgaccctgatatgttggttagaactttgagaaagctgagacgtcgggtt
gatgttaatactgaagttggcgttgttagagatatccgtcttaaagaactgcgcatatat
acagattatggtcgctgcagtcgtcctttattcattgtggataaacaaaggcttctcata
aagaaaaaggacattcattctttgcaacaaagggaatctcctgaagagggtggatggcat
gatcttgtgtccaagggttttatagaatatatcgacacagaagaggaagagactactatg
atttccatgacaattaatgatcttgtacaagcaaggctcaatccagaagaagcatattct
gatacttacactcactgtgaaatccatccatcactgattttgggtgtatgtgcttccatc
ataccatttcctgaccacaatcagtcccctcgtaatacatatcaatctgcaatgggaaaa
caagcaatgggaatatatgttaccaactaccagtttcgaatggataccttggcctatgtg
ttgtattatcctcaaaagccactggtcactacaagagccatggagcatcttcatttccgt
caactccctgctggaattaatgccattgtggccatttcatgttattctggttacaatcaa
gaagattctgtcatcatgaaccaatcatcaatagaccgtggcttctttcggtcactgttt
ttccgctcatatagagatgaagagaagaaaatgggaacccttgtcaaagaagattttggt
cggccggatagagctaatactatgggtatgagacatggttcttatgataagttggacgat
gatggtcttgctccacctggcacaagagtgtctggtgaggatgttattattggaaagacc
actcctttatctcaggaggaggcacaaggacaagctgctcgttactcaaaacgtgatcac
agcataagcttacgtcacagtgaaactggaattgttgatcaagttctgttgacaacaaat
gctgatggattgagattcgtgaaagtaagggtgagatctgttcgaataccacagattggt
gacaaattcagtagtaggcatggtcagaaggggacagttggtatgacttatacacaagaa
gacatgccctggactgtggaaggcatcactcctgatattattgtcaatccacatgctatt
ccttcccgaatgactattggtcagcttattgagtgtatcatggggaaggtagcagcccac
atgggaaaagaaggagatgcgactccttttacagatgttactgtggataatatcagcaaa
gctctacacaaatgtgggtaccaaatgcgtggttttgagacaatgtacaatggtcataca
gggaggcgtctcagtgcaatgattttccttggtcctacttactaccaaaggttgaagcat
atggttgatgacaagatccattctcgtggacgaggtcctgttcagattcttacaaggcaa
cctgctgaggggcgttcacgagatggaggtcttcgatttggagagatggaacgtgattgc
atgatagcccatggagctgctcatttcctaaaggaaagattgtttgatcaaagtgatgca
tatagggtccatgtatgcgaacactgtgggttgatagctattgcaaatctgaagaagaat
tcttttgagtgtaggggctgcaagaacaaaactgacattgttcaggtttacattccttat
gcttgtaagctgctcttccaagagctgatggctatggcaatagcaccaagaatgcttact
aaagagatcaaatctataaaagatcaaaagaagaaaggagcatga
DBGET
integrated database retrieval system
