Cicer arietinum (chickpea): 101505823
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Entry
101505823 CDS
T02819
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101505823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cam03400
]
101505823
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101505823
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
101505823
NCBI-ProteinID:
XP_004508573
UniProt:
A0A1S2YR17
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Position
7:complement(7287368..7297834)
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AA seq
942 aa
AA seq
DB search
MDENFDALNHKLPELKLDSKQAQGFLSFFKTLSDDPRAIRFFDRRDYYTAHGENATFIAK
TYYHTTTALRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKS
GTPGNIGNFEDVLFANSEMQDSPVVVALSLNFCENGCTIGLGFLDLTKRLLGMAEFLDDS
HFTNVESALVALGCKECLVPIERAKSIEYRMLCDVLTKCGVMLTERKKSEFKTRDLVQDL
GRLVKGSIEAVQDLVSGFEFAPGALGALLSYAELLADESNYENYSLRRYNLDSYMRLDSA
AMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVEEINSRLDVVQA
FVEDTVLRQDLRQHLKRISDIERLVHNLQKRRAGLQHVVKLYQSSIRLPYIKSAIDRYDG
QFSSMMKSRYLKDLELWTGVDRLHKFIELVETSVDLDHLENGEYMISSSYDSKLTELKEQ
QESLESQIHNLHRQTADDLDLPMDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL
ETRKDGVKFTNTKLKKLGDRYQQIIEEYKSCQKELVNKVVEIAATFSEVFESLAELISEL
DVLLSFADLASSCPTPYTRPDITSSDKGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS
WFQIITGPNMGGKSTFIRQVGVNILMAQIGSFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFAT
HFHELTALALENGSNDPHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPSAISLIDSTEEEGSKRKREFEPDDVSQGAAKARQI
LEAFVALPLETMDKKQALQEVKKLKDNLEKDAQNCHWLQKFL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacttcgacgccctcaatcataaactccccgagctcaaattagactctaag
caagcacaagggtttctgtcatttttcaaaaccctatcggatgacccgagggccattagg
ttttttgatcgtcgggattactatactgcccatggtgagaatgcaacattcattgccaaa
acctactatcacactactactgctttgagacagttgggtagtggatcaaatgctctttcc
agtgtaagtgtcagtaggaacatgtttgaaacaattgcccgtgatctacttttagagaga
acagaccatacacttgaggtctatgagggcagcggctctaactggagattggtcaaaagt
ggtacacctggtaacatcggcaattttgaagatgttttatttgctaacagtgaaatgcaa
gattctccagttgttgttgccctgtcacttaacttctgtgaaaatgggtgcaccattgga
ttaggatttcttgatctaactaagagactacttgggatggctgaattccttgatgacagt
catttcacaaatgtggagtcagcattggttgctcttggttgcaaagaatgccttgtgcct
attgagcgtgcaaaatctattgaatatagaatgttgtgtgacgtgttgactaaatgtggt
gtgatgctaactgagagaaagaaatctgagtttaagactagagatctggtacaagatctt
ggcaggcttgtcaaaggttctattgaagcagttcaagatttagtgtctggatttgaattt
gcacccggtgctctgggggcactgctatcttatgcagagttactggcagacgaaagcaat
tatgaaaattatagtctgcgtaggtacaatcttgacagttacatgaggttggattctgca
gccatgagggcacttaatgtcatggaaagcaaaactgatgcaaacaaaaacttcagtttg
tttggtctcatgaataggacctgtacagctggaatgggaaagcggttattgcacatgtgg
ctaaaacagccattattagatgtagaagaaattaactccaggttggatgtagtacaggca
tttgtagaggacactgtgcttcgccaagatctgaggcagcatctaaaaagaatatcagac
attgagcgtttggtgcacaatcttcagaagcgaagagctggtctgcaacatgttgtcaaa
ctttatcagtcaagtatacgactgccttacattaaaagtgctatagacaggtatgatgga
caattttcctcaatgatgaagtccaggtatttgaaggatttggagttatggaccggtgtc
gatcgccttcataaatttattgagcttgtagaaacttctgttgaccttgatcatctggag
aatggggaatacatgatttcctcaagttatgactctaaactaactgaactgaaggagcag
caagaatcactagagagccaaatacataacttgcacagacaaactgctgatgatcttgat
ctgcctatggataaggcattaaagttggataagggcacacaatttggacatgttttcaga
atcacaaagaaggaagagccgaaaataaggaagaagctcaacacccagtttattgtactg
gaaacccgtaaagatggagtgaagtttaccaacacaaaactcaaaaaactgggggacaga
taccaacaaattattgaggagtacaagagctgtcaaaaagagttggttaataaagtagtt
gaaattgcagcaactttctccgaggtgttcgaatctttagctgaattaatttccgaattg
gatgtgttacttagttttgctgatttggcttctagttgtcctactccgtatacaaggcct
gacatcacctcatcggacaaaggagatattattttagaaggtagcagacacccttgtgtt
gaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagaggaaaaagt
tggtttcaaataataacagggcctaacatgggcgggaaatcaacattcatccggcaggtg
ggcgtgaatattttgatggcacaaattggttcgtttgttccatgcgacaaagccagcata
tctgttcgtgattgcatttttgctcgtgttggtgcaggtgactgccaacttcgtggagtt
tctacctttatgcaagaaatgcttgaaactgcgtcaatattaaaaggagctactgacaag
tccttgataatcattgatgagttgggacgtgggacatcaacttacgatggatttggccta
gcttgggcaatttgtgagcacattgttgaagtgatcaaagcacctactttatttgcaacc
cactttcatgagctgactgcattagcccttgaaaatggtagcaatgatccacataagcaa
attgttggtgtggcaaattatcatgttagtgcacatattgatgcatcaacccgcaagcta
actatgctatacaaggttgaaccaggagcttgtgatcagagttttggtattcatgtcgct
gagtttgcaaacttccctgaaagtgttgtcgccctagctagagaaaaggcagcagagttg
gaagatttttctccctctgcgatatccttaattgactctacggaagaggaaggttctaaa
cgtaagagagaatttgaacctgatgatgtgtctcaaggggctgcaaaggctcgccaaatt
cttgaagcgtttgttgctttgccactagaaaccatggacaaaaagcaagctttgcaagaa
gttaagaagttgaaagataatttagagaaggatgcacaaaactgtcattggttgcagaaa
ttcttgtag
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