Cicer arietinum (chickpea): 101506177
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Entry
101506177 CDS
T02819
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101506177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101506177
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101506177
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101506177
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Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101506177
NCBI-ProteinID:
XP_004495115
UniProt:
A0A1S2XVD5
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Position
4:1261797..1265431
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AA seq
327 aa
AA seq
DB search
MRGIQLQLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTTDLN
GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAYLM
LSAMNMPDGVQRRRTALDELNMRCIFEEMDVICAEVRGFQHDGLHLQARSQKYGKLSTGQ
LLTVPPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEARDDMVEDQVNQTDPQVLI
PNKDSVSFEEQEKNYTALETRKYICRAANAVRVLSSLGFIITLEIIKGVFELSLSSNLDI
HDMLGSEFCVLVAEKEAERRSSNKKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagagggattcagttacagttaagtcaaactcagaaggtccgtctacagaaggctcta
gaacaacttgaatctctatcttccaaggtcaattccgatgcttccgtaaccatagctgat
tctatccccgtcaaccatgaagatggcgtactcaagggacacggaaccaccgacctcaac
ggcgaagttgttgccactctctgcggtgttgttgagcgtgttaataagctcgtatatgtc
cgctccttgcgctcaaggtataagcccgaggttggtgacattgttataggccgtgttgtt
gaggttgctcagaagcgttggagattggatattaattacagtcaaaatgcttatctgatg
ctttctgctatgaatatgcccgatggtgtacagaggcgaaggacagctttagatgagcta
aatatgcgctgtatttttgaggagatggatgtcatttgtgctgaagttcgtggtttccag
catgatggcttacaccttcaagcaagaagtcaaaaatatggaaagcttagtactggtcaa
ctgcttactgtccctccgtatttagtgaagagacagaaacaacatttccatcatctagag
cagtatggtattgatttaattattggctgtaatggattcatatgggttggggaacatgtc
gaagctagagatgacatggtagaagatcaagtgaaccaaactgatccacaagttttaatt
cccaataaagattctgtcagttttgaagaacaagagaaaaattatacggcattggagaca
agaaaatacatatgcagggctgccaatgctgttagagtattatctagtttaggattcatt
ataacactggagatcatcaaaggagtttttgaactaagtctttcttctaatcttgatata
cacgacatgcttggttctgagttttgtgttctggttgccgaaaaggaggcggaaaggaga
agctcaaataaaaagaagcggtag
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