Cicer arietinum (chickpea): 101506892
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Entry
101506892 CDS
T02819
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101506892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cam04131
]
101506892
Membrane trafficking [BR:
cam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101506892
Hops complex
101506892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf_RING_Vps8
zf-RING_11
zf_RING_Vps8_fungal
Nup54_57_C
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
101506892
NCBI-ProteinID:
XP_004487326
UniProt:
A0A1S2XFS1
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All DBs
Position
1:complement(49454868..49464543)
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AA seq
986 aa
AA seq
DB search
MDHGRQVFTVDLLERHAAKGHGVITCMAAGNDVIVIGTSKGWVIRHDFGGGDSHEFDLSV
GRQGDQSIHRVFVDPGGCHCIATVVGQGGAETFYTHAKWTKPRVLSKLKGLVVNAVAWNR
QQITEVSTKEVILGTDNGQLHELAVDEKDKKEKYIKFLYELTELAGALMGLQMETATVIN
EARYYVMAVTPTRLYSFTGFGSLETVFSSYLDRTVHFMELPGDIPNSELHFFIKQRRAVH
FAWLSGAGIYHGGLNFGGQQSSSGNGNFIENKALLNYSKLSEGIEAVKPSSMALSEFHFL
LLLENKVKVVNRISENIIEDLQFDQTSDSASKGIIGLCSDATAGLFYAYDQNSIFQVSIN
DEGQDMWKVYLDMKEYAASLANCRDPFQRDQVYLVQAEAAFSSKDYFRAASFYAKINCIL
SFEEVTLKFISAGEQDALRTFLLRKLDNLEKDDKCQITMISTWTTELYLDKINRLLLEDD
SAVENNNSDYQSIIKEFRAFLSDSKDVLDETTTMKLLESYGRVEEMVYFASLKGQYEIVV
HHYIQQGEAKRALEVLQKPSVPVDLQYKFAPDLIALDAYETVESWMATKNLNPRKLIPAM
MRYSSEPHAKNETHEVIKYLEYCVHKLHNEDPGVHNLLLSLYAKQEDDSSLLRFLECKFG
KGPDNGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADK
VEDDEDLRKKLWLMIAKHVVEQEKGTKRENIRMAIAFLKETDGLLKIEDILPFFPDFALI
DDFKEAICSSLEDYNKQIEQLKEEMNDTTHGADNIRNDISALAQRCTVIDRDEECGVCRR
KILNTGREFGMGRGFTSVGQMAPFYVFPCGHAFHAQCLIAHVTRCTVEDHAEYILDLQKQ
LTLISSEARRESNGNLALEVSIPSMTTIDKLRSQLDDAIASECPFCGDLMIREISLPFIL
PEEDQHVVSWEIKPNVGTQRNIPLPV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgggaggcaagtgttcaccgtggaccttctcgaacgacatgctgcaaagggc
catggagttatcacctgtatggctgctggaaatgatgtcattgttattggaaccagcaaa
ggatgggttattagacatgattttgggggtggcgattcacatgagtttgatctatctgta
ggtcgtcagggggaccagtcaatccacagagtttttgttgatccaggagggtgtcattgt
attgccactgttgttggccaggggggagctgaaactttctatactcatgcgaaatggacc
aagccgcgagttttgagcaagcttaaaggtcttgttgtgaatgctgttgcgtggaatagg
caacagataactgaagtttccacgaaggaagtcattcttggtacagataacggtcaactt
catgaactggctgtggacgagaaggacaagaaggaaaagtatatcaagtttctctatgaa
ttgacagaactggcaggagctttaatgggtttacagatggaaacggctaccgtaattaat
gaggctagatattatgtgatggcagttactcctactcggctttactctttcactggcttt
gggtcactagaaactgtgttttcaagttatttagaccgtacagtgcatttcatggaactt
cctggcgacataccaaacagtgagttgcattttttcattaaacaacgaagagctgtacat
tttgcatggctctccggagctggtatttaccatggtggcttaaactttggagggcaacaa
agctcaagtggaaatggaaattttattgaaaacaaggctcttttgaactactccaagctg
tctgaaggaattgaagcagttaaaccaagttcaatggcattgtctgaattccatttcttg
ttgcttttagagaataaagtcaaggttgtaaaccgaattagtgagaacatcatagaagat
cttcagtttgaccaaacttctgattcagcatcaaagggtattattggactgtgtagtgat
gccacggctggtttattctatgcatacgatcaaaactcaatctttcaggtgtctatcaac
gatgagggtcaagatatgtggaaagtgtatcttgatatgaaagaatacgccgcttcttta
gcaaattgtcgtgacccttttcaaagggaccaagtatacttggtgcaggctgaagctgcg
ttttcctctaaagattattttagagctgcatctttctatgccaaaatcaattgtatttta
tcatttgaggaggtcactttgaagttcatcagcgctggtgaacaggatgctttgagaact
ttcttattgcggaagcttgataatttagaaaaagacgacaaatgccaaataacaatgata
tccacctggacaactgaattatacctggacaagataaatcgtctgcttttagaagatgac
tctgctgtggagaataacaattcagattaccaatcaattattaaagagtttcgtgctttt
ctcagtgacagcaaggatgtattggatgaaacaactacaatgaaacttttagaaagttat
ggaagggttgaagaaatggtatattttgctagcttaaaagggcagtatgagattgtagtt
caccattacattcagcaaggagaagcaaaaagagcactggaagttcttcagaaaccttca
gtgcccgtagaccttcagtataagtttgctccagaccttatcgcccttgatgcatatgaa
actgtggagtcatggatggctacaaagaatttgaacccaaggaaactgattcctgcaatg
atgcgttattcaagtgaacctcatgcaaagaatgagacacatgaagttattaaatatctt
gaatattgtgttcataaactgcataatgaagatccgggtgttcataacctgctgctttct
ttatatgcaaagcaggaggatgatagttcgcttctacggtttctagaatgcaaatttgga
aaaggaccagacaatggtcctgaattcttctacgatcccaagtatgctctacgtctttgc
ctcaaggaaaaacgaatgcgtgcatgtgttcatatatacagcatgatgtctatgcatgaa
gaagcagttgctcttgccctacaggttgatccagagctagctatggctgaagccgataag
gttgaagatgatgaagatttgagaaagaagctctggctcatgattgccaaacatgttgtc
gaacaagaaaaaggaactaagagggaaaacataaggatggcaattgcatttcttaaagaa
accgacggtttgctgaagatcgaggatatattaccgttctttccagattttgccctgatt
gatgacttcaaggaagctatctgctcatcattggaggattacaacaagcaaattgaacag
ttgaaggaagagatgaatgacacaacccatggggctgataacatcagaaatgatatcagt
gcacttgctcaaagatgcactgttattgatcgagacgaggaatgcggggtatgtcgacga
aagattctaaatactggcagggagttcggcatgggccgtggttttacatcagtaggacaa
atggctccattttatgtctttccatgtggacatgctttccacgcacaatgcctgattgcc
cacgtcactcgttgtacagttgaggaccatgctgagtatattctggatctacagaagcaa
cttactttgataagcagtgaagcaaggagagaatccaatggcaatcttgctttagaagtg
tccattcctagcatgaccactatagataagctccgatcacaactagacgacgctatagct
agtgaatgcccattttgtggggacttgatgatccgagagatttctttgccatttatcctt
cctgaggaagatcagcacgtggtatcatgggagataaaaccaaacgttggaacccagaga
aatattccattacctgtctga
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