Cicer arietinum (chickpea): 101507100
Help
Entry
101507100 CDS
T02819
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101507100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101507100
03012 Translation factors [BR:
cam03012
]
101507100
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101507100
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101507100
Translation factors [BR:
cam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101507100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
AAA_16
Dicer_dimer
ATPase
Motif
Other DBs
NCBI-GeneID:
101507100
NCBI-ProteinID:
XP_004503308
UniProt:
A0A1S2YDP6
LinkDB
All DBs
Position
6:complement(2085085..2097000)
Genome browser
AA seq
1178 aa
AA seq
DB search
MPLTPMRIRVPYSGIFRLATRRPILIPPTRFSRPSTFTSTSTPTTTNLRLRLSSSSPAFR
HKTLAVPFLHQQSSTYGRFAFRDVSSDDSDLEIASSHSHARPQPQPQQQLGDSTLENIDA
WRWKLTMLLRNKDEQEVVSNEKKDRRDFLQLETLATRMGLYSRQYAKLVVFSKAPLPNYR
PDLDDKRPLREVTIPYGVHREVDTHLLAHLSHKATNRLGSLDDSLHRSSNDGSIPGDKGI
FEHVEPMSHNSVVKEKILQRRGLQMRQQQQGWQESPEGIKMLEFRSSLPAFKEKDAFLKV
VSENQVIVVSGETGCGKTTQLPQYILESEIEAARGALCNIICTQPRRISAISVSERVAAE
RGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMN
EDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTFPVRAHFLEDIL
ERTGYCLTPYNQIDDYGKDKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTQE
SLSCWNPDSIGFNLIEHVLCHIVKNERAGAVLVFMTGWDDINSLMDQLQAHPLLGDHRRV
LLLACHGSMSSSEQKLIFEHPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDA
LNNTPCLLPAWISKAAARQRKGRAGRVQPGECYHLYPRRVYDAFADYQLPELLRTPLQSL
CLQIKSLQLGSISEFLSSALQPPEPLSVQNAVEYLKIIGALDENENLTVLGRKLSVLPVE
PKLGKMLILGAIFDCLDPILTVVAGLSVRDPFVMPADKKGLAESVKAQFAARDYSDHLAL
VRAYDGWKDAEAQKAGYEYCWRNFLSSQTLRAIESLRKQFFHLLKDIGLVGNNSETNNKW
RNEVHMLRAVICAGLFPGISSVVNKEKSIALKTMEDGQVLLYANSVNAAVPKIPYPWLVF
NEKVKVNTVFLRDSTAISDSMLLLFGGNISKGGLDGHLKMLGGYLEFFMKPELAKTYSTL
KRELEELIQKKLLDPMFDTQSQNELLSAVRLLVSEDHCDGRFVYGPQIKATNSKSGVEVE
GDNSKNQLQTFLNRARHGLPTYKTQQLRNNQFRSTVIFNGLDFVGQPCNSKKLAEKSAAA
EAMLWLKGDSHSSGDIDHASVLLKKSNKNSRKKSFSGS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgccactaacgccgatgcgaattcgagtaccatactccggtattttcagactcgccact
cgccgtcctatcctcataccaccaacacgcttttcacgtccttctacttttacttctact
tccactcccacaaccacaaaccttcgccttcgcctttcatcctcttcacccgctttcagg
cacaaaacccttgctgtgccctttttgcatcagcaaagttccacttacggtcgttttgca
tttcgtgacgtctccagtgatgactctgacctcgaaattgcttcttctcactcacatgct
cgccctcaacctcaacctcaacaacaattgggtgattcaactcttgaaaacattgatgcc
tggagatggaaacttaccatgcttcttcgcaataaagatgagcaagaagttgtgtccaat
gagaaaaaggatcgccgtgattttctccaacttgaaactttagctaccaggatgggttta
tatagtcgacagtatgcaaaacttgttgtctttagcaaggcacctttgccaaattaccgc
cctgatctcgatgataagcgtcccctgagagaggtaaccataccatacggtgttcataga
gaagtagatactcatctccttgctcatctttcacataaggctacaaatagattaggatct
ttggatgattccttgcacagatcaagtaatgatggaagcattcctggtgacaaaggaatt
tttgagcacgtggagcccatgagccataatagtgttgtcaaagagaaaatccttcaaaga
agaggcttgcaaatgcgtcagcaacaacaaggctggcaggaatctcctgaagggataaag
atgcttgaatttcgtagtagtcttcctgcattcaaagagaaagatgcatttttgaaagtc
gtttcagagaatcaggtcattgttgtctcaggtgaaactggttgtggtaagaccacacag
cttcctcaatacatattagaatctgagatagaagctgcacgtggagctctatgtaacata
atttgtactcagcctagaagaatatctgctatatctgtttctgaaagagttgcagcagaa
cgtggggaaaaattgggagaatctgttggttataaagttcgtttggagggtatgaaaggg
agggatactcgtcttcttttttgtaccacaggtgttttattgcggagactacttgtggat
agaagtttaaaaggtgtaactcatgttattgttgatgaaattcatgaacgtggaatgaat
gaagattttcttctcattgtcctgaaagatcttctccctcgtcggcctgatttgagatta
attctgatgagtgcaactttaaatgctgagctattttcttcctactttgatggtgccccg
actatgcatatacctggatttacatttccagttcgagcacattttcttgaggatattctg
gaaaggactggatattgtttgactccttataatcaaattgatgactatggtaaagataaa
acatggaaaatgcagaaacaagctcagtctttcaaaaaaagaaagagccagattgcttct
gctgttgaggatgcattagaggttgcagactttaagggttatagcctacgcactcaggag
tcattgtcttgctggaaccccgactcaattggtttcaaccttatcgaacatgttctttgc
cacattgttaagaatgaaagggcaggtgctgttttggtttttatgactggttgggatgat
ataaactctttgatggatcaacttcaagctcatcctttgttgggtgatcacagaagagta
ttacttcttgcgtgccatggctctatgtccagctcagagcagaagttaatatttgaacat
cctgaaggaggggtgaggaagattgttctggctactaatatggccgagactagtattacc
atcaacgacgttgtctttgtggttgattgtggaaaagcaaaagagacatcatatgatgcg
ttgaataacactccttgtttgcttccagcatggatctcaaaagctgctgcccgacagagg
aaaggaagggctggtcgtgttcaacctggcgaatgctaccatctttatcccagacgcgtt
tatgatgcttttgctgattatcaattgccagagcttttaagaacacctttgcagtcctta
tgtctacaaataaaaagtctacaacttggaagcatctctgagtttttatctagtgctctg
cagccaccagagcctctatcggtccaaaatgctgttgaatatttgaagatcatcggtgcc
ttagatgagaatgaaaatttgacagttcttgggcgcaagttgtcggtgcttcccgtagag
cccaagcttggcaagatgctcatcttgggagctattttcgactgtttggatcccatattg
actgttgttgctgggcttagtgtgagagatccatttgttatgcctgctgacaagaagggg
cttgcagagtctgtcaaggcccagtttgctgctcgtgactatagtgatcatcttgcactt
gtccgggcctatgatggttggaaagacgccgaagcacagaaagctggttacgagtactgt
tggcgaaattttctttcttctcaaacacttagggctattgaatctcttcgaaagcaattc
tttcacttgctcaaagatattggtctggttggcaacaattctgaaaccaacaataaatgg
cgtaatgaggtgcatatgcttcgggcagttatctgtgcgggtttgtttcctggaatatcc
tctgttgtgaacaaggaaaagtcaatagcattgaaaacaatggaggatggtcaggttctt
ctgtatgctaactcagtaaatgctgcggtacccaaaattccatacccatggttagtgttt
aatgaaaaggttaaagtgaatacagtattcctcagggattcaacggccatatctgattcc
atgctgctcttatttggcgggaacatatccaaaggtggactagatgggcacctgaaaatg
ttgggagggtatctggaatttttcatgaaaccagagttagccaagacttattcaacttta
aagagggaactggaggaactgatacagaaaaaacttctggatccaatgtttgatacacaa
tcgcaaaatgagcttctttcagctgtaagattgttggtatccgaggaccattgcgatggc
cgatttgtttatggtccacaaattaaggcaacaaactccaaaagtggtgttgaagtcgag
ggtgacaattctaaaaatcagcttcaaacatttcttaacagggctcgacatggattacca
acttacaaaacacaacagctgagaaacaaccaattccgttctactgtcatattcaatggc
ttggattttgttggccagccatgcaacagtaagaaactagcagaaaaatctgctgctgct
gaggctatgctatggttaaaaggggacagccattcatccggtgatattgaccatgcatct
gtgcttttgaagaaaagcaacaagaacagtaggaaaaaatcatttagtggcagttaa
DBGET
integrated database retrieval system
