Cicer arietinum (chickpea): 101507429
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Entry
101507429 CDS
T02819
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101507429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101507429
03019 Messenger RNA biogenesis [BR:
cam03019
]
101507429
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101507429
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101507429
U7-dependent histone pre-mRNA processing factors
101507429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
101507429
NCBI-ProteinID:
XP_004485469
UniProt:
A0A1S2XB31
LinkDB
All DBs
Position
1
Genome browser
AA seq
687 aa
AA seq
DB search
MSSVKRLNSVSSNKDEDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGMAAL
PYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTYATKAIYKLLLSDYVKV
SKVSIEDMLFDEQDINRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVR
VLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQG
GRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI
QNAKSNPFSFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNACVIP
GYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYISFSAHADSAQTSAFLEELNPPNII
LVHGEANEMGRLKQKLTSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVG
ETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFSVIQHRLKQIYESVE
LSVDEESGVPTLLVHERVTVKHETEKHVSLHWTSDPISDMVSDSVVALVLNISRDLPKIM
AESDAVKIEEANEKKAEKVMHALLNSLFGDVKVGENGKLIINIDGNVAELNKESGEVESE
NEGLKERVRTAFRRIQSSVKPIPLSAP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtaaagagattgaatagtgtgagcagcaacaaagatgaagatcaattgata
gtgacaccattaggtgccggaaatgaagtcggtcgttcttgcgtctacatgtcatataaa
ggcaaaaccgttttattcgattgcggtatccatccagcttattccggcatggcggcgctg
ccgtacttcgacgaaatcgatccttcgacggtcgacgtacttctcatcactcatttccac
ttggatcatgccgcatcgctcccttattttctcgagaaaaccacttttagaggtcgagtg
ttcatgacatacgcaactaaggctatttacaaactactcttgtccgattacgttaaagtc
agtaaggtttctattgaagacatgcttttcgacgaacaagatattaaccgctccatggat
aaaattgaggttattgatttccatcaaacgcttgaagtgaatggtattcgattctggtgt
tacactgcaggccatgtcctcggtgctgctatgtttatggttgacattgcaggtgttcga
gtgttgtatacaggagactattcacgtgaggaagaccgacatcttcgagctgcagagacc
cctcagttctctcctgatgtctgcattatagaatctacctatggtgtacaacaccatcag
cctcggcacacccgagaaaaacgcttcactgatgttattcattcgaccatttctcaaggg
ggtcgtgtgttgattccagcttttgcacttggtcgtgcacaagagcttctattaatcctt
gatgagtattgggcaaaccatccagaactccagaatatacccatctactatgcttctcct
cttgctaaaaaatgtttgactgtgtatgagacttacaccctttcaatgaatgacaggatt
cagaatgcaaagtcaaatccattttcgtttaagcacatatcagctttgagtagcattgat
attttcaaagacgtaggaccgtctgtggtgatggcgagtcccggtggactacagagtggg
ttatcgcggcaattatttgatatgtggtgctctgacaagaaaaatgcttgtgttataccc
gggtatgttgttgaggggacactggccaaaaccatcatcaatgaaccaaaggaagtcact
cttatgaatggactttctgcacctctcaacatgcaggtgcactacatctccttttctgct
catgctgactctgctcaaacaagtgctttcttggaagagctcaatccgcctaacataatt
ctcgttcacggggaagctaatgagatgggaaggctcaaacagaagctcacaagtcagttt
gcagatcgtaacactaagatcctcactcctaaaaactgtcaatctgttgaaatgtatttc
aattcacagaaaatggcaaaaaccattgggaagctggctgaaaaaacaccagaagtgggt
gaaactgtcagtggattgctagttaaaaaaggcttcacgtatcagataatggcacccgat
gatctccatgtcttctcacaactatcaacggcaaacgttactcagagaattaccatccct
tattcaggggccttcagtgtcatacagcatagacttaaacaaatatatgagagtgtggag
ctgtcagtggatgaagaatctggagttccaacattgttagttcatgagcgcgtgacggtg
aagcatgagactgagaagcatgtctccttgcattggacatcagaccccattagtgacatg
gtatcagattcagttgttgctctagttttaaatatcagccgtgatctaccgaaaataatg
gctgaatcggatgctgtaaaaattgaggaagcaaatgagaagaaggcagagaaggttatg
catgccctcctcaattcactctttggagatgtgaaggtaggagaaaatgggaagctgata
attaacattgatggcaatgtggcagaacttaacaaagaaagtggtgaagttgagagtgaa
aatgaaggccttaaagaaagagtgagaacagcattccggcgaattcaaagttccgtaaag
ccaattcctctttctgcaccgtag
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