KEGG   Cicer arietinum (chickpea): 101507740
Entry
101507740         CDS       T02819                                 
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
cam  Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:cam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cam04812]
    101507740
Cytoskeleton proteins [BR:cam04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101507740
SSDB
Motif
Pfam: Katanin_con80 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 eIF2A WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 101507740
NCBI-ProteinID: XP_012568557
UniProt: A0A1S3DYI5
LinkDB
Position
1:complement(2102517..2112249)
AA seq 1121 aa
MAKRGYKIQEFVAHSSNVNCLNIGKKACRLFVTGGDDHKVNLWTIGKPTSLTSLSGHTSP
VESVAFDSGEVLVLGGSSSGVIRLWDLEEAKMVRTVSGHRSNCTSVEFHPFGEFFASGST
DTNLKLWDIRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGLDNVVKVWDLTAGKLLHDF
NFHDGHISSLDFHPLEFLLATGSADKTVKFWDLETFELIGSARREATGVRSIAFHPDGRT
LFSGHEDGLKVFSWEPVICHDTVDMGWTTLGDLCIHDGKLLGCSFYRNSVGVWVADISLI
EPYGDGLDLKKDEGTEQKLSLKGSKLEKAEVDLGPTSGFRSISPDESKEIKNIYIDSAGG
KPVTLQRSGSYSSANVGLAEESKEIYNLETVKQTPTTKVHVKSDEQETRKSHFVPNIEPR
NIPDAKDSPKPEKEIITFSKTKPGMLLKPAHVRRASTGRFDVDRLSDVNSGTFSDTKCKL
DNTKDPKFQTDLGSRNEVKESCEDKHPIKNVTDKSDKTVSPYSFFNLTKRDESSICKEEN
IPVKYVNGVAVVRGRTRSLVERFERRERXXXXRVQISEDQISPSLPTINETGGKICNEDQ
TNASPTMIFEMKEKIPHNEDQTNAPSSTVFERKERIPRNEDQAKSPPFAVFEERVPCNED
QTNAPLSTVFERKERIPCGVDQTNTYPSNVFERKELIPRDEVQTNAPSSTTFERKELIPR
DEVQTNAPSSTTFERKELIPCNEVQINTSPSKVFERKERIPRNNVQTNAYPSTVFERKEK
VPRSEGQTNAPPSGVFERKERIPRNEVQTNAPPSTVFERKERIPRNEVQTNASPSTVFEK
KERIPRNEMQTNASASTVFDRKERNPRNVGQTNTSTSTVIERKERIPRSEIQTNAPSYTV
FERKERVPRNQDLNNMPSVPNTTTEIDKSSTPNIPKVEPQVSQKDSNSPNEMEIIEGLMQ
THDVTLSTLRSRLTKLQVVRHFWERSDIKGAINALRKLPDQSVQADVISVLVEKMEILTL
DLLSSLLPVLTGLLDSKTERHVKVSLDMLLKFAAVFGPTINATISAPPSVGVDLHREQRR
ECCNKCFMELQKVQRILPILIRRGGILAKSSLELNLVLQQS
NT seq 3366 nt   +upstreamnt  +downstreamnt
atggcaaagcgtggatacaaaatacaggaatttgtggctcattcaagcaacgtaaattgt
ttaaatattggaaagaaggcgtgtcgtcttttcgttacaggaggggatgatcacaaggtc
aatctatggactattggaaaaccaacttccttaacgagcctatctggtcatactagtcca
gtcgaatctgttgcatttgattcgggagaagtgttagttcttggtggatcatcttcgggt
gtgataaggctttgggatttggaagaagcaaagatggttcgcactgtttccgggcacaga
tccaattgtacttctgttgagtttcatccatttggtgagttttttgcatctggctccacg
gacactaatctaaagctttgggacatccggaaaaaaggatgtattcatacatacaagggt
catagccaaggcatcagtactatcaaattcactccggatggccgttgggtagtttctggt
ggacttgataatgttgtgaaggtgtgggatctaactgctggaaagcttttgcatgacttc
aatttccatgacggacacattagttccttagatttccatccgctcgagtttcttctggct
acaggttcggcagataaaacagtgaaattctgggatttagaaacctttgaactgatagga
tctgccagacgtgaggctacaggggtacgctcaatagcttttcatcccgatggaaggacc
ctatttagcgggcatgaagatggtttgaaggtgttttcttgggaacctgttatttgtcat
gatactgttgatatgggatggacaacacttggtgatctctgcatccacgatgggaaactt
ttagggtgctcattctaccgaaactctgttggagtttgggtagcagacatatcacttatt
gagccgtatggggatggcttggatctcaagaaagatgaaggcacagagcagaaacttagt
cttaagggaagtaaactggaaaaagcagaggttgatctaggaccaacttctgggtttcga
agcatatctcctgatgagtcaaaagagataaagaatatatatatcgactctgctggtggg
aagcctgttactttacagagatcaggatcatatagttctgcaaacgtaggtctcgcagag
gaatcgaaggaaatttataacctggaaacggtgaagcagactcctacaacaaaagttcat
gtaaaatcagatgaacaagagactagaaaatctcactttgtgccaaacattgaaccgcgg
aacattcctgatgctaaggactcaccaaaacctgaaaaagagatcatcactttttcaaag
acaaaacctgggatgttacttaaaccagctcatgttcggagagcgtccactggcagattc
gatgttgataggttgtcagatgtgaactctggaactttttctgatactaaatgtaaatta
gacaatacaaaagatcctaagttccaaactgatcttggatctcggaatgaagtcaaagag
tcttgtgaagataaacatcctatcaagaatgtcaccgacaagtctgacaaaactgtatct
ccatacagtttttttaacctgacaaaacgtgatgagtcctctatttgcaaggaagaaaat
attccagttaaatatgtcaatggagttgctgttgtgcgaggaaggacccgttctctggtg
gagaggtttgaaagaagggaaagannnnnnnnnnnaagagttcaaatcagcgaagatcaa
attagtccatccctacccacaataaatgaaacaggtggaaaaatttgtaatgaagatcaa
actaatgcatcccccaccatgatatttgagatgaaagagaaaattccccacaatgaagat
caaactaatgcaccctcctccacagtatttgagaggaaagaaagaattccccgcaatgaa
gatcaagctaaatcaccccccttcgcggtatttgaagaaagggttccctgcaatgaagat
caaactaatgcacccctctccacggtatttgagaggaaagaaagaattccttgcggtgta
gatcaaactaatacatacccctctaatgtatttgagaggaaagaattaattccccgtgat
gaagttcaaactaatgcaccctcctccaccacatttgagaggaaagaattaattccccgc
gatgaagttcaaactaatgcaccctcttccaccacatttgagaggaaagaattaattccc
tgcaatgaagttcaaattaatacatccccctctaaggtatttgagaggaaagaaagaatc
cctcgcaacaatgttcaaactaatgcatacccctctacggtatttgagagaaaagaaaaa
gttccccgtagtgaaggtcaaactaatgcacccccctccggggtatttgagaggaaagaa
agaattcctcgaaatgaagttcaaactaatgcacccccctccacagtatttgagaggaaa
gaaagaattccccgcaatgaagttcaaactaatgcatccccctccacggtatttgagaag
aaagaaagaattccccgcaacgaaatgcaaactaatgcatctgcctcaacggtatttgat
aggaaagaaagaaatccccgcaatgtaggtcaaactaatacatccacctccacagtaatt
gagcggaaagaaagaattccccgcagtgaaattcaaactaatgcaccctcctacacggta
tttgagaggaaagaaagagttccccgcaatcaagatctaaacaatatgccctctgttcca
aacacaacaactgaaattgataaatcatccactcccaacataccgaaagtcgaacctcaa
gtttctcaaaaggattcaaactctccaaatgaaatggaaataattgaaggtctgatgcaa
acacatgatgtcacattaagtactcttcgttcacggttgacaaagttacaggtcgtgcgg
catttttgggagcgcagtgatatcaaaggtgctatcaatgctttgagaaagctgccagat
caatctgttcaagcagatgttattagtgtgcttgtggaaaagatggagattcttacatta
gatttactttcttccttgcttcctgtactcacaggcttgttggatagcaagacagaaaga
catgtaaaggtgtcactggatatgttgttaaagtttgctgcagtttttggtcctacaata
aatgcaaccatctcagcaccgccctcggttggggttgatctgcatcgagagcaaagacga
gaatgctgcaacaagtgctttatggaactgcaaaaagtccaaaggattcttccaatattg
atacggaggggtggtatattggccaaatcatctctagagctaaatcttgttcttcaacaa
tcctaa

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