Cicer arietinum (chickpea): 101508263
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Entry
101508263 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03013
Nucleocytoplasmic transport
cam03015
mRNA surveillance pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101508263
09122 Translation
03013 Nucleocytoplasmic transport
101508263
03015 mRNA surveillance pathway
101508263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101508263
03041 Spliceosome [BR:
cam03041
]
101508263
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101508263
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101508263
Spliceosome [BR:
cam03041
]
Complex C
Other components
EJC/TREX
101508263
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101508263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
101508263
NCBI-ProteinID:
XP_012573070
UniProt:
A0A1S3EB72
LinkDB
All DBs
Position
6:25597706..25606557
Genome browser
AA seq
426 aa
AA seq
DB search
MGELKDTEAYEEELIDYEEEDEKTLDSTKPASETVKKGYVGIHSSGFRDFLLKPELLRAI
VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLC
HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALT
RDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTPHDKQVMMFSATLSKDIRPVCK
KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQEPEKNRKLNDLLDALDFNQVVIFVKSVSRA
AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI
NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAGDSEVLNQVQSRFEVDIKELPEQIDT
STYMPN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattgaaagacactgaagcttacgaggaagaactcatcgactacgaagaagaa
gatgaaaagactcttgattctactaaacctgcttctgaaacagtcaagaagggctacgtt
gggatccatagttcgggatttcgagacttcctgttgaaaccagagcttcttcgagccatt
gttgattcaggatttgagcatccttcagaagtgcaacacgaatgcatccctcaagcaatt
ttaggcatggatgtcatttgccaagcaaagtctgggatgggaaagactgctgtttttgtt
ctgtcatcacttcagcaaattgatcctgttcctggtcaggttgcagcacttgttctttgc
cacacaagagaactagcttatcagatttgccacgaatttgagaggttcagcacatacctt
ccagatataaaagttgctgtgttctatggtggtgtcaacatcaaggttcacaaagaattg
ctcaagaatgagtgtccccacattgttgttggaacacctgggaggattcttgccctgaca
agagataaggaccttggcttaaagaatgtgaggcattttatacttgatgagtgtgacaag
atgctggaatcacttgacatgagaaaagatgtgcaagagattttcaaattgactccccat
gataaacaagtgatgatgttttcggctacactcagcaaagatatccgacctgtttgcaag
aaatttatgcaagatcccatggaaatttatgtagatgatgaggccaaattgactcttcat
ggtcttgttcagcactacatcaaattacaagagccagaaaagaatcgtaagctgaatgat
cttcttgatgctctggacttcaaccaagttgttatttttgtcaaaagtgttagcagagca
gcagaattgaataagttgctcgttgagtgtaacttcccatcaatatgcatacattctgga
atgtcacaagaagaaagattgaagcgatacaagggcttcaaagaggggaagcaaaggatt
ctcgttgcaactgatttagttggaagggggattgatatagaacgtgttaatatagtcatc
aactatgacatgcctgattctgctgatacctatcttcacagggttggaagagctggtaga
tttggcaccaagggacttgcaattacctttgtgtcttctgctggtgactcagaagttctt
aatcaggtgcaatctaggtttgaggttgatattaaggagcttcccgaacaaattgacacc
tctacatacatgcctaattga
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