Cicer arietinum (chickpea): 101509283
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Entry
101509283 CDS
T02819
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03022
Basal transcription factors
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101509283
09124 Replication and repair
03420 Nucleotide excision repair
101509283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101509283
03400 DNA repair and recombination proteins [BR:
cam03400
]
101509283
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101509283
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101509283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
101509283
NCBI-ProteinID:
XP_004496077
UniProt:
A0A1S2XXH4
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Position
4:complement(8217491..8229821)
Genome browser
AA seq
586 aa
AA seq
DB search
MSSSQQVVKRAKYKTTVKDPGTPGVLKLTQEKLVFKPNDPTSNNRVEVDFRLIKNHKHTK
EGSNKPPWLNLGHSQGSYIFELENFSDLHVCRELVGIALSKHVEPPKVVSDEQLSPAEMT
LRIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDT
KPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAEYIHST
KNTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIF
RDGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLARRKQESDGV
IEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKSLDDSLAGKEQIR
CNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGKSSQESV
LDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEEIKV
SAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNARGTKPNGYV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctcaacaagttgttaagcgtgctaaatacaaaaccactgtgaaagatcct
ggtacacctggcgtcctcaaattgactcaagaaaagcttgttttcaagcctaatgatccg
acatcaaacaacagagtcgaagttgatttcagattgattaaaaatcataaacacaccaaa
gagggatcaaacaaaccaccgtggcttaaccttggacattctcagggaagttacatcttt
gagttagagaacttttcagatcttcatgtttgccgggaattagtcggtatcgcccttagc
aagcatgtagaacctccgaaagttgtttctgatgaacagcttagccctgctgaaatgaca
cttaggattaagctattgcaagaagatagtaaactgcagaagcttcataaggaccttgtg
gctagtggtaagcttacagagtcagaattttgggctacaaagaagaaattgcttgaccaa
gatgaaagcagaaagttaaaacaaaggattggatttaaaaattctttgatctttgacaca
aagcctactagtgatggtcggataaaccaggttaaatttcagttgacaccggagataaaa
tatcagatttttgccctcaaaccagcagttcaccaggcattcctcaattttgttcccagt
aagatgagtgaggtagatttctggaacaaatacttcaaagctgaatatatccacagtacc
aaaaacactattgcggcagctgccgaggctgctgaagatgaggatcttgctgtttttttg
aaagatgacgagatattagaaaatgaagctcgaaagaaggttcgacgggtggatccaact
ttggacatggaagcagaccaaggagatgattacactcatcttcctgatcatgggatcttc
cgggatggtagcaaggaaacagccgaagctcaaaatactttctatcggagaactttgttg
caagatcttaacagacaaagtgaagttgttctcgaaggaaaaactttagatatggatatg
gaacatccaagaacagtggcagaagtgcttgctcggagaaaacaggaatctgatggggtt
atagaggaggagagacgaaacagaatttctaagatgacccagattgaggatcttcaggca
caagatgatcatcgttttgcaccactctgtatcaaggatcctcgcgactattttgattct
caacaagttaatgcactaaaatctttggatgattcccttgctggaaaggagcaaataaga
tgcaatttgggttctgaggaagcctatggatctttgagagagtccatatcgaagatcaaa
gctatcggattaatggatcctctattgagtcctgaggttgcttttaaggtccttaacgga
ttgaccaaaaatatctcaagcaccaaatcacatctcgggaaaagttctcaggagagtgtc
cttgatatacttcccaatacaactaaggagaaactactagatcattgggtttgcagtcag
gaattgctgaggcacttttggtcttcctatccagtaacaacacaaaaccttgttaataag
accaaaagaatgaaagatgccatatcacaaatatattctaaacttgaggaaataaaggta
tctgcaaagtcagacctgcggcaccaggtttcccttgttgtccatccaatgcagcaggct
ctggatgctgccttgttacattacgatgctgacgttaggaaaagaaatgcaagagggaca
aagcctaatggttatgtttag
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