Cicer arietinum (chickpea): 101509572
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Entry
101509572 CDS
T02819
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101509572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101509572
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101509572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101509572
NCBI-ProteinID:
XP_004491591
UniProt:
A0A1S2XMG9
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Position
2:52204179..52208958
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AA seq
481 aa
AA seq
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MQSDNGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVA
EIVIKEKHNIDGRMVEAKKAVPRDDQNVLSRNSGSIQGSRGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLSGYNYGLSRVNSFLNGFTQGYTPNTVGNYGLRMDGRFSPVAGGRN
AFAQFGSGYGMSMNFEPGLSAGFGGNANFNGNLSYGRGLNPYFIGNSNRFGSPVGYESGN
GGNSSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSGSGSVGGNTFSNTGGVNWGSSAISG
HGGGNNVSQSGGNLGYGGGNNGYGLGTEGYGRSSGSTLAPTSSYSTSNGGGGVDGAFADF
YNNNSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSAKTSPGYVGGYTVNKRQPNRGIT
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgataatggcaagctatttataggtggaatatcttgggacacaaatgaagaa
cgactcagagagtatttcagtacttatggtgaagttaaggaagcagtgataatgaaggat
cggacaaccggtagagcccgtggatttggttttgttgtttttatcgatccagcagttgca
gaaattgtcataaaagagaagcacaacattgacggacggatggttgaggcgaagaaagct
gttcctagggatgatcaaaacgtattgagtagaaacagtggtagcatccaaggttctcgt
ggtccaggtcgcacgagaaagatatttgttgggggcttagcttctactgtaacagagagt
gatttcaagaagtattttgatcagtttgggactataacagatgttgtagtaatgtatgat
cacaacactcagaggccaagaggttttggatttatcacttatgattctgaagaggctgtt
gaccaggtcttacttaagacgtttcatgaattgaacgggaaaatggttgaggtcaagcga
gcagttcctaaggagttatcgccaggacctagccgcagtcctcttagtggatataactat
ggtctgagtagggtcaatagtttcttaaacggcttcactcaggggtatactccaaatact
gttggaaactatggacttcggatggatggtaggttcagtccggttgccggcggtcgaaat
gcatttgcacagtttggatctggttatggaatgagtatgaattttgagcctggtttgagt
gctggatttgggggaaatgcaaatttcaatggcaatcttagctacggacggggcttaaac
ccttactttatcggcaactccaataggtttggaagtcctgttggatatgaaagtggtaac
ggaggaaacagttctttcttcagttccgtgactcgaaacttgtggggaaatggaagcctt
aactacggaacaagttctgcaaattccaatgcatacattggatcagggagtgggagtgtt
ggaggaaacacgttcagcaatactggaggagtcaactggggttcttcagcaatttctgga
cacggtggagggaacaatgtgtcgcagagtggtggcaaccttggatatggaggtggcaac
aatggttatggattggggaccgaaggttatggaagaagcagtggttccactcttgcaccg
acatcttcatactctacatcaaatggtggtgggggtgttgatggggcttttgccgatttt
tacaacaataattcagtctatggggacccaacttggcgatcttcaaactctgagagagat
ggatctggtccctttggttacggacttggtggtgcagcttcggatgtttctgccaagact
tctcctggttatgttggtggttatactgttaataaaaggcagccaaataggggaattact
acatag
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