Cicer arietinum (chickpea): 101509997
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Entry
101509997 CDS
T02819
Name
(RefSeq) polyadenylation and cleavage factor homolog 4 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101509997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101509997
03019 Messenger RNA biogenesis [BR:
cam03019
]
101509997
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101509997
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101509997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
zf_UBZ
Pcf11_C
VHS
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
101509997
NCBI-ProteinID:
XP_004489376
UniProt:
A0A1S2XHC1
LinkDB
All DBs
Position
2:1669379..1675181
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AA seq
841 aa
AA seq
DB search
MSNEIGQKPPPSILVGRFKALLKQREDDPRLRNSQPPSTEEIVQIYELLLSELTCNVKPI
ITDLTIIAEQHREHAKGIAYAICARILEVSADQKLPSLYLLDSIVKNVGQEYVRYFSLRL
PEVFCEAYRQVQPSLHSAMRHLFGTWSKVFPPSVLQKIEVQLQFSQAVNNQPSSVNSLRA
SESPRPIHGIHVNPKYIRQMERSTSIMDGVGGERLDSTGTVGNANFGLVGSKIHQFVPGR
VERSSSPSRIGLDRHMPSYMDEYVAENSAVRTVERESSHLAVDHGLAKGLGREEELGEWP
RKQFSGDGRKRFQASMTYNLSNGQLRQNPRALIDAYGSDKSQETSSSKPLLVERMGRNGI
DKGLTTSWQNTEEEEFDWEDMSPTLVDHSRNSGILQSTIGFSSEKPVTVATSATSSVSRM
FPGLKSNIEYRPPVLPATFEARHSLNMHGLRPPSLNPVFPLKNPVRNPFESINANGNIVS
HGLIRPFPIHEQSLHSVENNDISKRNLHQLPNQLGGLISSNPPNSGPTPQLQFFPSQDPA
ASQFTYRSSLQGHGAAISTPMPNARPVMPLPLPGQRIANNSLHFQGGALRPLPPTGPHAP
SQMLPHPNPSPFVSSQQPSVGYSNLISSLMAQGVISLANQAPTQDFVGIEFDPDILKVRH
ESAVSSLYGDLPRQCTTCGLRFKSQDEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSESMW
LSGAEALGTESAPGFLPTETTEEKKEDEELAVPAEEDQNTCALCGEPFDEFYSDETEEWM
YRGAVYLNAPNGITAGMDRSQLGPVIHAKCRSESTTSPSEDFVMDEGGTFEEGNPRKRMR
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgagatcggacagaaacctccaccgtcaatactcgttggcagattcaaggct
ctgttgaagcaacgtgaagatgatccaaggcttagaaattcacaacctccttcaactgaa
gaaattgttcagatttacgaattgttattgtcggaactcacgtgtaatgtgaaacctatc
atcactgatctcactatcattgctgaacaacatagggaacatgctaaaggaatcgcttat
gctatttgcgctcgtattcttgaggtgtcagcagatcaaaagcttccttcactctatctc
ctggacagtattgtgaagaatgttggccaggaatatgttcgatacttctccttacgtcta
cccgaagttttctgcgaggcatacagacaagttcaaccaagtttgcattctgctatgcga
catctctttggtacctggtcaaaagtcttccctccctccgtcttacagaagattgaagtg
caattgcaattttctcaagcagttaataatcaaccatccagtgttaattccctcagggct
tctgaatctcctcgaccaattcatgggatacatgttaacccaaaatacataagacagatg
gaacgctctacttcaattatggatggtgttggaggtgaaaggttagactcaacaggaact
gtaggaaatgcaaattttggccttgtaggtagtaagattcatcaatttgtgccaggtaga
gtagaaagatcctcttcaccatcaagaattggacttgataggcatatgccctcatatatg
gatgaatatgtagctgaaaattctgctgtcaggacagttgagagggaatcttctcatctt
gctgttgatcatggactagctaaaggattaggtagggaagaagagttgggtgagtggccg
cggaagcagttttctggtgatggtcggaagaggtttcaagcttctatgacatacaatctt
agtaatggacaactgcgtcaaaatccaagagctctaattgatgcctatggtagtgacaaa
agccaagaaacttctagcagtaagcctttgttagttgaacggatgggtagaaatggtatt
gataagggtttgacaacatcgtggcagaatactgaagaggaggagtttgattgggaagat
atgagtccaacactagtagaccatagtaggaatagtggtatcctgcaatcaactattggt
ttctcctcagaaaagcctgttactgttgcaaccagtgcaacttcttcggtgtcaaggatg
tttcctggtctcaagtctaatattgagtaccgtccaccagtcttgccggcaactttcgaa
gcaagacactctctaaatatgcacggtcttcgccctcccagcttaaatcctgtatttcca
ttgaagaatcctgttaggaatccatttgaatcaataaatgctaatggtaacattgtgagt
catggtctaattagaccttttcctatacatgaacaatcgttgcatagtgttgagaacaat
gacatcagtaaaagaaacctgcatcagttacctaatcagctaggtggtctgatttcatct
aacccgccaaacagtggaccaacaccacaattacagttttttccatctcaggatccagct
gcatcacaatttacttataggagctctttgcaaggacatggtgctgctattagtaccccc
atgccaaatgcacgacctgttatgccactccctttgccaggccagagaatcgcaaacaac
tctttacatttccaggggggagctttgcgacctttacctccaaccggcccacatgctcca
tcccagatgttacctcatcccaatcctagtccttttgtgtcaagccaacagccaagtgtt
ggatattctaatttgattagttcactcatggcccaaggtgtaatctcattggctaatcaa
gcccctacacaggattttgttggaattgagtttgatccggatattctgaaggttcgtcat
gaatctgcagtcagtagcttatatggtgatcttcctagacagtgcacaacttgtggtctc
cgattcaaatcccaagatgagcacagcagtcacatggattggcatgtgactaagaatcgt
atgtctaaaaaccgtaaacagaagccctctcgcaagtggtttgtgagtgagagcatgtgg
cttagtggtgcagaggcattgggaactgaatcagctccaggatttttgccaaccgaaacc
actgaggaaaagaaagaagatgaagagttggcagttcctgctgaagaggaccagaataca
tgtgcattatgtggagaacctttcgatgagttttacagtgatgaaacagaggagtggatg
tatagaggagctgtataccttaatgcgcctaatgggataacggcaggcatggacaggtcg
cagttaggtcctgttattcatgctaaatgcagatccgaatctactacgtccccatccgaa
gattttgtgatggatgaagggggcacctttgaagaaggcaatccaagaaaacgaatgcgg
ggctga
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