Cicer arietinum (chickpea): 101510142
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Entry
101510142 CDS
T02819
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101510142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101510142
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101510142
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101510142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ammonium_transp
EXOSC1
ECR1_N
DUF3082
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
101510142
NCBI-ProteinID:
XP_012569904
UniProt:
A0A1S3E3F5
LinkDB
All DBs
Position
4:complement(4373819..4389914)
Genome browser
AA seq
1032 aa
AA seq
DB search
MEAVGEMVTPGEVVGRTWDVKAGRGTYLALHNNTVYASLTGLRHTIPPPSDSPDQRPVIE
VTGHKAHGPVPEPGSVVIARVTKVMAKTASADIMCVGQKSVREKFTGIIRQQDVRATEID
KVDMHLSFRPGDIVKALVLSLGDARAYFLSTAKNELGVVSAESTAGATMVPISWTEMQCP
LSGQIEQRKVAKVASLHSFIKVGMKTMASTSLHLLPSLSKFITPLSQHHTHPFPSTTSLR
FPYSINTIFLHKPLSLRFALTESDSPKSTEPDPKTLLQQISDSFDLPPDYFVQFPSDLRL
DLNDAAFDLSNGPVLDECGKELGETLLNLSRAWELADTSSSRSLVAKLPLMEANLTGTAK
SALGKRLISAGRRFQSMGLYGQGETQKIAKAMIAAGRALSASSTSADVDKQPKDKNRTLK
FGALQVEITPEKANIGAAIAFVFGILSWEIAQGVQNIPESSLQYANDNALMLAKSLRGTL
LAIVYSSTLLSALTSVGLVLLGIQIKSDMASLSCSPTDLAPFITATANATAAANYLCSQF
NAISNKLSDTTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG
GLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPEPSRDYSFFLYQWAFAIAAAGIASGSIA
ERTQFVAYLIYSSFLTGFVYPIVSHWFWSDDGWASPTRTDGNVLFGSGVIDFAGSGVVHM
VGGIAGLWGAFIEGPRIGRFDRSGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIV
KGYGNGKRGDYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLAGHWNVIDVCNGLLGGF
AAITSGCSVVEPWAAIVCGFVAAWVLIGLNKLAVKMEYDDPLEAAQLHGGCGAWGVLFTG
LFAKGEYVSEIYGIGRPYGLLMGGGGRLIAAQVIEVLVVCGWVTVTMAPLFYGLHKMKLL
RISRDEESMGMDLTRHGGFAYVYHDEDEDESIKRAGFMMGRIEPASLSLSPSAVITLEQA
SPSPITALPPPV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtgggggagatggtaacaccaggagaagtagttggcagaacatgggacgtc
aaagccggaagaggaacttacttagcacttcacaacaacaccgtttacgcctccttaact
ggcctccgccacaccatacctccaccttcggactctcctgaccagagaccggttatcgaa
gtaactggtcataaagcccatgggcctgttccagagcctggttctgttgtcattgctcgt
gttaccaaagtgatggctaaaactgcttcagctgatattatgtgtgttgggcaaaagtct
gttcgtgaaaaatttactggtatcattaggcagcaggatgttagggcaactgagattgat
aaagtagacatgcacttatcttttcgtcctggtgacattgttaaagctctcgtgctttcc
cttggagatgcacgggcgtactttctgtcaaccgcaaagaatgaacttggtgttgtttct
gcagaaagcactgctggtgcaactatggttccaataagttggaccgaaatgcagtgccca
ctttccggtcaaattgaacaaagaaaggtagccaaggttgcaagccttcattcattcatt
aaggttgggatgaaaacaatggcttcaacttctcttcatcttcttccctctctctccaaa
ttcataacccctctttcccaacatcacacccatccattcccttccacaacctcactcaga
ttcccctattccatcaataccatttttcttcacaaacctctctctctgcgctttgctcta
acagaatctgactcacctaaatccacagaacctgaccctaaaactcttctccaacaaatt
tccgacagttttgatcttccccctgattactttgtgcagtttcccagcgatcttcgatta
gacctaaacgacgcagcgttcgacctttcaaatggacctgtcttggatgagtgtggcaaa
gagttgggagagacattgctaaacctctcgagagcatgggagcttgctgatacatcatcc
tctcgctccttagtggcaaagcttcctttgatggaggctaatttgacaggcactgccaaa
tcagcactcggaaagcgtttgatatcagctggaagaaggtttcagtcaatgggactgtat
ggccaaggtgaaacacaaaagattgcaaaagcaatgattgcggctgggagagctctatct
gctagttcaacgtctgcagacgtagataaacaacctaaagacaaaaataggacgctgaag
tttggagcattgcaggttgaaattacacccgaaaaagccaatattggggcagcaattgca
tttgtttttgggattctgtcatgggaaatagctcagggagttcaaaacattccagagagt
tctttgcagtatgcaaatgacaatgctttgatgcttgctaagtctttgaggggaacattg
cttgctattgtctactcctccactctcttgtctgcacttacttcggtggggcttgtttta
ctcggtatacagatcaagtcagacatggcttctctctcttgctcacccaccgacctcgct
ccattcatcaccgccacagcaaacgcaaccgccgcagctaactacctctgctcccaattc
aatgccatttcaaataaactcagcgacaccacctatgcagtgaacaacacgtaccttctt
ttctcagcttatttagtcttcgccatgcagctcggcttcgccatgctctgcgctggctcc
gttcgagccaaaaacaccatgaacatcatgctcaccaacgtccttgatgctgccgccggt
ggactctcctactatctcttcggcttcgctttcgcctttggtgcaccctccaacggcttc
atcggccgccactttttcggtctcagggattaccctgaaccgtccagagactatagtttc
ttcctctaccagtgggctttcgccatcgcggcagccggtatcgccagcggctccatcgcc
gagagaactcaattcgttgcatatcttatatattcttctttcttgaccggttttgtttac
cccattgtttcgcattggttctggtctgatgatggttgggccagcccaacacgaaccgat
ggtaatgttttgttcgggtccggcgtcatcgatttcgccggttcaggtgtggttcacatg
gttggtggtatagcaggtttatggggggcttttattgaaggtccaagaatcggccggttc
gaccggtcggggaggtctgttgcattaaaaggacacagcgcgtcattggttgtgttgggt
tcatttttattatggttcggttggtacgggttcaatcccggttcgtttttaacaatagtg
aaaggctatggaaatggtaagagaggggattattatggtcaatggagtgctattggaagg
acagctgtcacaactacattggctggatgcactgctgctctcacaactctttttagtaaa
cggttattggctggacattggaacgtgattgacgtgtgtaacggcctccttggcggtttc
gctgcaatcacttcgggctgttctgtagtggaaccgtgggccgcgattgtgtgtgggttt
gttgcggcctgggttttaattgggcttaacaaattggcggtgaaaatggaatatgatgat
cctttggaagcggcgcagttacacggagggtgtggcgcgtggggggttttgtttacgggt
ttgtttgcgaagggagaatacgtgagcgagatttacgggattgggaggccgtacgggtta
ttgatgggcggtggagggagattaattgcggcgcaggtgattgaggtattggtggtgtgt
gggtgggtgacggtgacgatggcgccgttgttttatgggcttcataagatgaaattgttg
aggatatcgagggatgaagagagtatggggatggatttgacgagacatggtgggtttgct
tatgtgtatcacgatgaagatgaagatgaatcgattaagagagcagggtttatgatgggt
aggattgaacccgcgagtttgtcgctatctccttccgccgtgattacactcgaacaagct
tcgccgtcgccaatcactgcactaccaccaccagtgtga
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